Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
MACF1Q9UPN3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC7.49□□□□□ -1.21
MACF1Q9UPN3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
MACF1Q9UPN3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC7.49□□□□□ -1.21
MACF1Q9UPN3 AC025580.3-201ENST00000617932 1424 ntBASIC7.49□□□□□ -1.21
MACF1Q9UPN3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 IGHV3-65-201ENST00000523210 341 ntBASIC7.48□□□□□ -1.21
MACF1Q9UPN3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 AL390754.1-201ENST00000619088 582 ntBASIC7.48□□□□□ -1.21
MACF1Q9UPN3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 FAM58DP-201ENST00000428076 619 ntBASIC7.48□□□□□ -1.21
MACF1Q9UPN3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 AC007541.1-201ENST00000570282 1469 ntBASIC7.48□□□□□ -1.21
MACF1Q9UPN3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
MACF1Q9UPN3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 AC008556.1-201ENST00000610908 2040 ntBASIC7.47□□□□□ -1.21
MACF1Q9UPN3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 FEM1AP1-201ENST00000431297 1995 ntBASIC7.47□□□□□ -1.21
MACF1Q9UPN3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 HOXB1-202ENST00000577092 1414 ntBASIC7.47□□□□□ -1.21
MACF1Q9UPN3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 AC253536.4-201ENST00000440539 267 ntBASIC7.47□□□□□ -1.21
MACF1Q9UPN3 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 AC006504.4-201ENST00000592118 1568 ntBASIC7.47□□□□□ -1.21
MACF1Q9UPN3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 AC074386.1-202ENST00000463561 864 ntBASIC7.47□□□□□ -1.21
MACF1Q9UPN3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 AC004890.2-204ENST00000481968 304 ntBASIC7.47□□□□□ -1.21
MACF1Q9UPN3 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC7.47□□□□□ -1.21
MACF1Q9UPN3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms