Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AP006288.1-201ENST00000446065 395 ntBASIC17.36■□□□□ 0.37
LHX6Q9UPM6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LHX6Q9UPM6 GUSBP12-201ENST00000513727 720 ntBASIC17.36■□□□□ 0.37
LHX6Q9UPM6 IGHV3-22-201ENST00000520721 359 ntBASIC17.36■□□□□ 0.37
LHX6Q9UPM6 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.36■□□□□ 0.37
LHX6Q9UPM6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.36■□□□□ 0.37
LHX6Q9UPM6 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LHX6Q9UPM6 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.36■□□□□ 0.37
LHX6Q9UPM6 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.36■□□□□ 0.37
LHX6Q9UPM6 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LHX6Q9UPM6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.36■□□□□ 0.37
LHX6Q9UPM6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LHX6Q9UPM6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.36■□□□□ 0.37
LHX6Q9UPM6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.36■□□□□ 0.37
LHX6Q9UPM6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LHX6Q9UPM6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LHX6Q9UPM6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LHX6Q9UPM6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LHX6Q9UPM6 AC036111.1-201ENST00000533973 1582 ntBASIC17.36■□□□□ 0.37
LHX6Q9UPM6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LHX6Q9UPM6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LHX6Q9UPM6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LHX6Q9UPM6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 AL645939.2-201ENST00000427340 991 ntBASIC17.35■□□□□ 0.37
LHX6Q9UPM6 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 AL603841.1-201ENST00000430516 664 ntBASIC17.35■□□□□ 0.37
LHX6Q9UPM6 HNRNPDP1-201ENST00000439535 754 ntBASIC17.35■□□□□ 0.37
LHX6Q9UPM6 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 AC034105.1-201ENST00000563488 319 ntBASIC17.35■□□□□ 0.37
LHX6Q9UPM6 SNHG9-202ENST00000564014 471 ntBASIC17.35■□□□□ 0.37
LHX6Q9UPM6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 AL512408.1-201ENST00000569378 2000 ntBASIC17.35■□□□□ 0.37
LHX6Q9UPM6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX6Q9UPM6 AC026471.1-201ENST00000564629 3026 ntBASIC17.34■□□□□ 0.37
LHX6Q9UPM6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LHX6Q9UPM6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LHX6Q9UPM6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LHX6Q9UPM6 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LHX6Q9UPM6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LHX6Q9UPM6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LHX6Q9UPM6 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LHX6Q9UPM6 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LHX6Q9UPM6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LHX6Q9UPM6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LHX6Q9UPM6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
LHX6Q9UPM6 AC004832.2-201ENST00000426397 482 ntBASIC17.34■□□□□ 0.37
LHX6Q9UPM6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LHX6Q9UPM6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.34■□□□□ 0.37
LHX6Q9UPM6 HNRNPA1P23-201ENST00000491091 1133 ntBASIC17.34■□□□□ 0.37
LHX6Q9UPM6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LHX6Q9UPM6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.34■□□□□ 0.37
LHX6Q9UPM6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.34■□□□□ 0.37
LHX6Q9UPM6 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
LHX6Q9UPM6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LHX6Q9UPM6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.34■□□□□ 0.37
LHX6Q9UPM6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.34■□□□□ 0.37
LHX6Q9UPM6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LHX6Q9UPM6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LHX6Q9UPM6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.33■□□□□ 0.37
LHX6Q9UPM6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LHX6Q9UPM6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LHX6Q9UPM6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LHX6Q9UPM6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LHX6Q9UPM6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LHX6Q9UPM6 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LHX6Q9UPM6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LHX6Q9UPM6 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms