Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AC008622.2-201ENST00000617006 1229 ntBASIC16.41■□□□□ 0.22
COPS3Q9UNS2 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
COPS3Q9UNS2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.41■□□□□ 0.22
COPS3Q9UNS2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
COPS3Q9UNS2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COPS3Q9UNS2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
COPS3Q9UNS2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COPS3Q9UNS2 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.4■□□□□ 0.22
COPS3Q9UNS2 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COPS3Q9UNS2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.4■□□□□ 0.22
COPS3Q9UNS2 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.4■□□□□ 0.22
COPS3Q9UNS2 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COPS3Q9UNS2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COPS3Q9UNS2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COPS3Q9UNS2 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COPS3Q9UNS2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COPS3Q9UNS2 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
COPS3Q9UNS2 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COPS3Q9UNS2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COPS3Q9UNS2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
COPS3Q9UNS2 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.4■□□□□ 0.22
COPS3Q9UNS2 FAM207BP-201ENST00000447172 505 ntBASIC16.4■□□□□ 0.22
COPS3Q9UNS2 KRT18P41-201ENST00000518924 1277 ntBASIC16.4■□□□□ 0.22
COPS3Q9UNS2 AC026271.3-201ENST00000571884 352 ntBASIC16.4■□□□□ 0.22
COPS3Q9UNS2 AC130371.2-201ENST00000619443 611 ntBASIC16.4■□□□□ 0.22
COPS3Q9UNS2 AL031985.4-201ENST00000642138 673 ntBASIC16.4■□□□□ 0.22
COPS3Q9UNS2 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COPS3Q9UNS2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COPS3Q9UNS2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COPS3Q9UNS2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COPS3Q9UNS2 BCL2-203ENST00000589955 5011 ntBASIC16.4■□□□□ 0.22
COPS3Q9UNS2 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.4■□□□□ 0.22
COPS3Q9UNS2 HTR7P1-202ENST00000624664 4411 ntBASIC16.4■□□□□ 0.22
COPS3Q9UNS2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
COPS3Q9UNS2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COPS3Q9UNS2 AL109659.2-201ENST00000606809 1674 ntBASIC16.4■□□□□ 0.22
COPS3Q9UNS2 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COPS3Q9UNS2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
COPS3Q9UNS2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
COPS3Q9UNS2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
COPS3Q9UNS2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 LINC00896-202ENST00000609602 2128 ntBASIC16.39■□□□□ 0.21
COPS3Q9UNS2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 C1QBPP2-201ENST00000528754 825 ntBASIC16.39■□□□□ 0.21
COPS3Q9UNS2 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
COPS3Q9UNS2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COPS3Q9UNS2 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COPS3Q9UNS2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COPS3Q9UNS2 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.38■□□□□ 0.21
COPS3Q9UNS2 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
COPS3Q9UNS2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.38■□□□□ 0.21
COPS3Q9UNS2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
COPS3Q9UNS2 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
COPS3Q9UNS2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COPS3Q9UNS2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COPS3Q9UNS2 GNAS-203ENST00000306120 1878 ntBASIC16.38■□□□□ 0.21
COPS3Q9UNS2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
COPS3Q9UNS2 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COPS3Q9UNS2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COPS3Q9UNS2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COPS3Q9UNS2 AL353807.1-201ENST00000427475 662 ntBASIC16.38■□□□□ 0.21
COPS3Q9UNS2 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.38■□□□□ 0.21
COPS3Q9UNS2 AC128676.1-201ENST00000454392 318 ntBASIC16.38■□□□□ 0.21
COPS3Q9UNS2 B3GAT3P1-201ENST00000471720 806 ntBASIC16.38■□□□□ 0.21
COPS3Q9UNS2 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.38■□□□□ 0.21
COPS3Q9UNS2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COPS3Q9UNS2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
COPS3Q9UNS2 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COPS3Q9UNS2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.38■□□□□ 0.21
COPS3Q9UNS2 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COPS3Q9UNS2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COPS3Q9UNS2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms