Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 HLA-F-220ENST00000434407 884 ntBASIC20.99■□□□□ 0.95
PCDHA4Q9UN74 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHA4Q9UN74 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.99■□□□□ 0.95
PCDHA4Q9UN74 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.99■□□□□ 0.95
PCDHA4Q9UN74 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHA4Q9UN74 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHA4Q9UN74 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDHA4Q9UN74 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDHA4Q9UN74 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHA4Q9UN74 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PCDHA4Q9UN74 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHA4Q9UN74 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PCDHA4Q9UN74 HBZP1-201ENST00000354915 429 ntBASIC20.98■□□□□ 0.95
PCDHA4Q9UN74 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.98■□□□□ 0.95
PCDHA4Q9UN74 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHA4Q9UN74 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDHA4Q9UN74 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PCDHA4Q9UN74 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.98■□□□□ 0.95
PCDHA4Q9UN74 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.98■□□□□ 0.95
PCDHA4Q9UN74 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PCDHA4Q9UN74 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHA4Q9UN74 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHA4Q9UN74 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHA4Q9UN74 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHA4Q9UN74 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDHA4Q9UN74 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
PCDHA4Q9UN74 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHA4Q9UN74 NEFHP1-201ENST00000412845 2629 ntBASIC20.97■□□□□ 0.95
PCDHA4Q9UN74 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHA4Q9UN74 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHA4Q9UN74 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHA4Q9UN74 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHA4Q9UN74 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHA4Q9UN74 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHA4Q9UN74 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.97■□□□□ 0.95
PCDHA4Q9UN74 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHA4Q9UN74 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDHA4Q9UN74 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHA4Q9UN74 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
PCDHA4Q9UN74 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHA4Q9UN74 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDHA4Q9UN74 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHA4Q9UN74 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDHA4Q9UN74 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHA4Q9UN74 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
PCDHA4Q9UN74 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHA4Q9UN74 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHA4Q9UN74 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHA4Q9UN74 AC135050.7-201ENST00000624508 2218 ntBASIC20.96■□□□□ 0.95
PCDHA4Q9UN74 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
PCDHA4Q9UN74 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
PCDHA4Q9UN74 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHA4Q9UN74 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHA4Q9UN74 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.96■□□□□ 0.95
PCDHA4Q9UN74 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDHA4Q9UN74 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PCDHA4Q9UN74 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PCDHA4Q9UN74 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHA4Q9UN74 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHA4Q9UN74 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDHA4Q9UN74 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHA4Q9UN74 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PCDHA4Q9UN74 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHA4Q9UN74 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PCDHA4Q9UN74 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHA4Q9UN74 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDHA4Q9UN74 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.95■□□□□ 0.95
PCDHA4Q9UN74 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.95■□□□□ 0.95
PCDHA4Q9UN74 LINC01311-201ENST00000565162 1445 ntBASIC20.95■□□□□ 0.95
PCDHA4Q9UN74 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.95■□□□□ 0.95
PCDHA4Q9UN74 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PCDHA4Q9UN74 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDHA4Q9UN74 PHGDH-209ENST00000641074 1780 ntBASIC20.95■□□□□ 0.94
PCDHA4Q9UN74 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDHA4Q9UN74 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHA4Q9UN74 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHA4Q9UN74 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDHA4Q9UN74 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDHA4Q9UN74 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHA4Q9UN74 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHA4Q9UN74 AL671277.2-201ENST00000458060 996 ntBASIC20.95■□□□□ 0.94
PCDHA4Q9UN74 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.95■□□□□ 0.94
PCDHA4Q9UN74 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.95■□□□□ 0.94
PCDHA4Q9UN74 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.95■□□□□ 0.94
PCDHA4Q9UN74 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHA4Q9UN74 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PCDHA4Q9UN74 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHA4Q9UN74 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PCDHA4Q9UN74 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
PCDHA4Q9UN74 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PCDHA4Q9UN74 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDHA4Q9UN74 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHA4Q9UN74 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDHA4Q9UN74 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDHA4Q9UN74 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDHA4Q9UN74 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PCDHA4Q9UN74 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDHA4Q9UN74 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHA4Q9UN74 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDHA4Q9UN74 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms