Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH9Q9ULB4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH9Q9ULB4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH9Q9ULB4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.38■□□□□ 0.69
CDH9Q9ULB4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CDH9Q9ULB4 AP002383.4-201ENST00000442518 975 ntBASIC19.38■□□□□ 0.69
CDH9Q9ULB4 HCG4P8-203ENST00000443049 980 ntBASIC19.38■□□□□ 0.69
CDH9Q9ULB4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.38■□□□□ 0.69
CDH9Q9ULB4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.38■□□□□ 0.69
CDH9Q9ULB4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH9Q9ULB4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH9Q9ULB4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
CDH9Q9ULB4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.38■□□□□ 0.69
CDH9Q9ULB4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
CDH9Q9ULB4 AC090616.6-201ENST00000582640 721 ntBASIC19.38■□□□□ 0.69
CDH9Q9ULB4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH9Q9ULB4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH9Q9ULB4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
CDH9Q9ULB4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.38■□□□□ 0.69
CDH9Q9ULB4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH9Q9ULB4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.37■□□□□ 0.69
CDH9Q9ULB4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH9Q9ULB4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CDH9Q9ULB4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH9Q9ULB4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH9Q9ULB4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH9Q9ULB4 LINC01126-201ENST00000623515 1646 ntBASIC19.37■□□□□ 0.69
CDH9Q9ULB4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH9Q9ULB4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.37■□□□□ 0.69
CDH9Q9ULB4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.37■□□□□ 0.69
CDH9Q9ULB4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.37■□□□□ 0.69
CDH9Q9ULB4 AC004263.2-201ENST00000617183 678 ntBASIC19.37■□□□□ 0.69
CDH9Q9ULB4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH9Q9ULB4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH9Q9ULB4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH9Q9ULB4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH9Q9ULB4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CDH9Q9ULB4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.37■□□□□ 0.69
CDH9Q9ULB4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CDH9Q9ULB4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH9Q9ULB4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.37■□□□□ 0.69
CDH9Q9ULB4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH9Q9ULB4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH9Q9ULB4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
CDH9Q9ULB4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH9Q9ULB4 AC093503.3-201ENST00000624917 2352 ntBASIC19.36■□□□□ 0.69
CDH9Q9ULB4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.36■□□□□ 0.69
CDH9Q9ULB4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH9Q9ULB4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CDH9Q9ULB4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH9Q9ULB4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH9Q9ULB4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.36■□□□□ 0.69
CDH9Q9ULB4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.36■□□□□ 0.69
CDH9Q9ULB4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH9Q9ULB4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH9Q9ULB4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH9Q9ULB4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH9Q9ULB4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH9Q9ULB4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CDH9Q9ULB4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.36■□□□□ 0.69
CDH9Q9ULB4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.36■□□□□ 0.69
CDH9Q9ULB4 MIR3180-1-201ENST00000580374 94 ntBASIC19.36■□□□□ 0.69
CDH9Q9ULB4 MIR3180-3-201ENST00000584616 94 ntBASIC19.36■□□□□ 0.69
CDH9Q9ULB4 AP002414.4-201ENST00000589764 1148 ntBASIC19.36■□□□□ 0.69
CDH9Q9ULB4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.36■□□□□ 0.69
CDH9Q9ULB4 AC092119.3-201ENST00000612618 583 ntBASIC19.36■□□□□ 0.69
CDH9Q9ULB4 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.36■□□□□ 0.69
CDH9Q9ULB4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH9Q9ULB4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH9Q9ULB4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH9Q9ULB4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH9Q9ULB4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.36■□□□□ 0.69
CDH9Q9ULB4 GMCL1P1-201ENST00000463439 1581 ntBASIC19.36■□□□□ 0.69
CDH9Q9ULB4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH9Q9ULB4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.35■□□□□ 0.69
CDH9Q9ULB4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.35■□□□□ 0.69
CDH9Q9ULB4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.35■□□□□ 0.69
CDH9Q9ULB4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH9Q9ULB4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CDH9Q9ULB4 KRT18P1-202ENST00000452408 1331 ntBASIC19.35■□□□□ 0.69
CDH9Q9ULB4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CDH9Q9ULB4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH9Q9ULB4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH9Q9ULB4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.35■□□□□ 0.69
CDH9Q9ULB4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.35■□□□□ 0.69
CDH9Q9ULB4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CDH9Q9ULB4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH9Q9ULB4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
CDH9Q9ULB4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH9Q9ULB4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH9Q9ULB4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH9Q9ULB4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH9Q9ULB4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH9Q9ULB4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH9Q9ULB4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH9Q9ULB4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH9Q9ULB4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH9Q9ULB4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.34■□□□□ 0.69
CDH9Q9ULB4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH9Q9ULB4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms