Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN2Q9UHD9 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBQLN2Q9UHD9 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.54■□□□□ 0.08
UBQLN2Q9UHD9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC15.54■□□□□ 0.08
UBQLN2Q9UHD9 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 PCDHA1-201ENST00000378133 2726 ntBASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 UQCRFS1P1-201ENST00000435169 820 ntBASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBQLN2Q9UHD9 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.52■□□□□ 0.08
UBQLN2Q9UHD9 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBQLN2Q9UHD9 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.52■□□□□ 0.08
UBQLN2Q9UHD9 RBM17P2-201ENST00000616397 1405 ntBASIC15.52■□□□□ 0.08
UBQLN2Q9UHD9 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBQLN2Q9UHD9 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBQLN2Q9UHD9 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBQLN2Q9UHD9 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
UBQLN2Q9UHD9 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBQLN2Q9UHD9 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBQLN2Q9UHD9 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
UBQLN2Q9UHD9 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
UBQLN2Q9UHD9 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
UBQLN2Q9UHD9 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC15.52■□□□□ 0.08
UBQLN2Q9UHD9 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
UBQLN2Q9UHD9 AC005181.1-201ENST00000604782 1256 ntBASIC15.52■□□□□ 0.08
UBQLN2Q9UHD9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
UBQLN2Q9UHD9 AC013268.1-206ENST00000638368 961 ntBASIC15.52■□□□□ 0.08
UBQLN2Q9UHD9 AC112229.1-201ENST00000639295 961 ntBASIC15.52■□□□□ 0.08
UBQLN2Q9UHD9 AC083906.6-201ENST00000641366 219 ntBASIC15.52■□□□□ 0.08
UBQLN2Q9UHD9 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
UBQLN2Q9UHD9 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBQLN2Q9UHD9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
UBQLN2Q9UHD9 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBQLN2Q9UHD9 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
UBQLN2Q9UHD9 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBQLN2Q9UHD9 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
UBQLN2Q9UHD9 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
UBQLN2Q9UHD9 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBQLN2Q9UHD9 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBQLN2Q9UHD9 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
UBQLN2Q9UHD9 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBQLN2Q9UHD9 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
UBQLN2Q9UHD9 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBQLN2Q9UHD9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBQLN2Q9UHD9 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBQLN2Q9UHD9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
UBQLN2Q9UHD9 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UBQLN2Q9UHD9 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
UBQLN2Q9UHD9 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
UBQLN2Q9UHD9 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBQLN2Q9UHD9 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UBQLN2Q9UHD9 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms