Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.29■□□□□ 0.52
SPASTQ9UBP0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPASTQ9UBP0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPASTQ9UBP0 IRX1P1-201ENST00000438849 1838 ntBASIC18.29■□□□□ 0.52
SPASTQ9UBP0 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SPASTQ9UBP0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.29■□□□□ 0.52
SPASTQ9UBP0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.29■□□□□ 0.52
SPASTQ9UBP0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.29■□□□□ 0.52
SPASTQ9UBP0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.29■□□□□ 0.52
SPASTQ9UBP0 AL121672.3-201ENST00000608644 468 ntBASIC18.29■□□□□ 0.52
SPASTQ9UBP0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.29■□□□□ 0.52
SPASTQ9UBP0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.29■□□□□ 0.52
SPASTQ9UBP0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SPASTQ9UBP0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SPASTQ9UBP0 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPASTQ9UBP0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.29■□□□□ 0.52
SPASTQ9UBP0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPASTQ9UBP0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPASTQ9UBP0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPASTQ9UBP0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPASTQ9UBP0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPASTQ9UBP0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.28■□□□□ 0.52
SPASTQ9UBP0 KRT8P32-201ENST00000512863 1461 ntBASIC18.28■□□□□ 0.52
SPASTQ9UBP0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SPASTQ9UBP0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPASTQ9UBP0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.28■□□□□ 0.52
SPASTQ9UBP0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SPASTQ9UBP0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
SPASTQ9UBP0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
SPASTQ9UBP0 MIR564-202ENST00000385049 94 ntBASIC18.28■□□□□ 0.52
SPASTQ9UBP0 HLA-F-220ENST00000434407 884 ntBASIC18.28■□□□□ 0.52
SPASTQ9UBP0 DUSP5P1-201ENST00000441325 1139 ntBASIC18.28■□□□□ 0.52
SPASTQ9UBP0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.28■□□□□ 0.52
SPASTQ9UBP0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
SPASTQ9UBP0 AC104390.1-201ENST00000555663 520 ntBASIC18.28■□□□□ 0.52
SPASTQ9UBP0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
SPASTQ9UBP0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.28■□□□□ 0.52
SPASTQ9UBP0 AC079602.3-201ENST00000623931 403 ntBASIC18.28■□□□□ 0.52
SPASTQ9UBP0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPASTQ9UBP0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPASTQ9UBP0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPASTQ9UBP0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPASTQ9UBP0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPASTQ9UBP0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPASTQ9UBP0 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPASTQ9UBP0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.28■□□□□ 0.52
SPASTQ9UBP0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPASTQ9UBP0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SPASTQ9UBP0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPASTQ9UBP0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SPASTQ9UBP0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPASTQ9UBP0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPASTQ9UBP0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPASTQ9UBP0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.28■□□□□ 0.52
SPASTQ9UBP0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
SPASTQ9UBP0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPASTQ9UBP0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.27■□□□□ 0.52
SPASTQ9UBP0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.27■□□□□ 0.52
SPASTQ9UBP0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.27■□□□□ 0.52
SPASTQ9UBP0 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SPASTQ9UBP0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
SPASTQ9UBP0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SPASTQ9UBP0 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPASTQ9UBP0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
SPASTQ9UBP0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.27■□□□□ 0.52
SPASTQ9UBP0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SPASTQ9UBP0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPASTQ9UBP0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPASTQ9UBP0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPASTQ9UBP0 AL450487.1-201ENST00000426799 995 ntBASIC18.27■□□□□ 0.52
SPASTQ9UBP0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.27■□□□□ 0.52
SPASTQ9UBP0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.27■□□□□ 0.52
SPASTQ9UBP0 TSSC2-201ENST00000450217 709 ntBASIC18.27■□□□□ 0.52
SPASTQ9UBP0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPASTQ9UBP0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPASTQ9UBP0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.27■□□□□ 0.52
SPASTQ9UBP0 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.27■□□□□ 0.52
SPASTQ9UBP0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.27■□□□□ 0.52
SPASTQ9UBP0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.27■□□□□ 0.52
SPASTQ9UBP0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.27■□□□□ 0.52
SPASTQ9UBP0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.27■□□□□ 0.52
SPASTQ9UBP0 AC010240.3-201ENST00000607688 395 ntBASIC18.27■□□□□ 0.52
SPASTQ9UBP0 FP475955.4-201ENST00000623131 1990 ntBASIC18.27■□□□□ 0.52
SPASTQ9UBP0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SPASTQ9UBP0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.27■□□□□ 0.52
SPASTQ9UBP0 AL391807.1-203ENST00000604392 2365 ntBASIC18.27■□□□□ 0.52
SPASTQ9UBP0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SPASTQ9UBP0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SPASTQ9UBP0 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPASTQ9UBP0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SPASTQ9UBP0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
SPASTQ9UBP0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
SPASTQ9UBP0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
SPASTQ9UBP0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
SPASTQ9UBP0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
SPASTQ9UBP0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPASTQ9UBP0 AL049812.1-201ENST00000432563 2267 ntBASIC18.26■□□□□ 0.51
SPASTQ9UBP0 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
SPASTQ9UBP0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.26■□□□□ 0.51
SPASTQ9UBP0 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms