Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 AC093677.2-201ENST00000600169 1863 ntBASIC17.15■□□□□ 0.34
RLIMQ9NVW2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 LINC00896-202ENST00000609602 2128 ntBASIC17.15■□□□□ 0.34
RLIMQ9NVW2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RLIMQ9NVW2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
RLIMQ9NVW2 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
RLIMQ9NVW2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RLIMQ9NVW2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.14■□□□□ 0.33
RLIMQ9NVW2 KRT8P45-201ENST00000414328 1447 ntBASIC17.14■□□□□ 0.33
RLIMQ9NVW2 AC112777.1-201ENST00000540175 1423 ntBASIC17.14■□□□□ 0.33
RLIMQ9NVW2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RLIMQ9NVW2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.14■□□□□ 0.33
RLIMQ9NVW2 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RLIMQ9NVW2 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RLIMQ9NVW2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RLIMQ9NVW2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
RLIMQ9NVW2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.14■□□□□ 0.33
RLIMQ9NVW2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RLIMQ9NVW2 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RLIMQ9NVW2 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RLIMQ9NVW2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
RLIMQ9NVW2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RLIMQ9NVW2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.14■□□□□ 0.33
RLIMQ9NVW2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RLIMQ9NVW2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.14■□□□□ 0.33
RLIMQ9NVW2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.14■□□□□ 0.33
RLIMQ9NVW2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.14■□□□□ 0.33
RLIMQ9NVW2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.14■□□□□ 0.33
RLIMQ9NVW2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RLIMQ9NVW2 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RLIMQ9NVW2 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.14■□□□□ 0.33
RLIMQ9NVW2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RLIMQ9NVW2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RLIMQ9NVW2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RLIMQ9NVW2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RLIMQ9NVW2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
RLIMQ9NVW2 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.14■□□□□ 0.33
RLIMQ9NVW2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RLIMQ9NVW2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.13■□□□□ 0.33
RLIMQ9NVW2 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RLIMQ9NVW2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.13■□□□□ 0.33
RLIMQ9NVW2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RLIMQ9NVW2 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RLIMQ9NVW2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RLIMQ9NVW2 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.13■□□□□ 0.33
RLIMQ9NVW2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RLIMQ9NVW2 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RLIMQ9NVW2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RLIMQ9NVW2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RLIMQ9NVW2 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.13■□□□□ 0.33
RLIMQ9NVW2 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.13■□□□□ 0.33
RLIMQ9NVW2 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RLIMQ9NVW2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.13■□□□□ 0.33
RLIMQ9NVW2 MYC-208ENST00000641036 567 ntBASIC17.13■□□□□ 0.33
RLIMQ9NVW2 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RLIMQ9NVW2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RLIMQ9NVW2 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RLIMQ9NVW2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RLIMQ9NVW2 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RLIMQ9NVW2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RLIMQ9NVW2 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RLIMQ9NVW2 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.12■□□□□ 0.33
RLIMQ9NVW2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 AC012313.1-201ENST00000593393 3059 ntBASIC17.12■□□□□ 0.33
RLIMQ9NVW2 AC139713.2-201ENST00000641328 2723 ntBASIC17.12■□□□□ 0.33
RLIMQ9NVW2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.12■□□□□ 0.33
RLIMQ9NVW2 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms