Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
ATP6V0A4Q9HBG4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.41■□□□□ 0.86
ATP6V0A4Q9HBG4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V0A4Q9HBG4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V0A4Q9HBG4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V0A4Q9HBG4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V0A4Q9HBG4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
ATP6V0A4Q9HBG4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V0A4Q9HBG4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.4■□□□□ 0.86
ATP6V0A4Q9HBG4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V0A4Q9HBG4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V0A4Q9HBG4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V0A4Q9HBG4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V0A4Q9HBG4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ATP6V0A4Q9HBG4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.4■□□□□ 0.86
ATP6V0A4Q9HBG4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V0A4Q9HBG4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V0A4Q9HBG4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V0A4Q9HBG4 AC005082.1-201ENST00000413042 2259 ntBASIC20.4■□□□□ 0.86
ATP6V0A4Q9HBG4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.4■□□□□ 0.86
ATP6V0A4Q9HBG4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
ATP6V0A4Q9HBG4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
ATP6V0A4Q9HBG4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V0A4Q9HBG4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V0A4Q9HBG4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
ATP6V0A4Q9HBG4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V0A4Q9HBG4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ATP6V0A4Q9HBG4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP6V0A4Q9HBG4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.39■□□□□ 0.86
ATP6V0A4Q9HBG4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP6V0A4Q9HBG4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.39■□□□□ 0.86
ATP6V0A4Q9HBG4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.39■□□□□ 0.85
ATP6V0A4Q9HBG4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.39■□□□□ 0.85
ATP6V0A4Q9HBG4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.39■□□□□ 0.85
ATP6V0A4Q9HBG4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP6V0A4Q9HBG4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATP6V0A4Q9HBG4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
ATP6V0A4Q9HBG4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.39■□□□□ 0.85
ATP6V0A4Q9HBG4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP6V0A4Q9HBG4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.39■□□□□ 0.85
ATP6V0A4Q9HBG4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.39■□□□□ 0.85
ATP6V0A4Q9HBG4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP6V0A4Q9HBG4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP6V0A4Q9HBG4 AC004408.2-201ENST00000623613 2777 ntBASIC20.39■□□□□ 0.85
ATP6V0A4Q9HBG4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP6V0A4Q9HBG4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATP6V0A4Q9HBG4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ATP6V0A4Q9HBG4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V0A4Q9HBG4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V0A4Q9HBG4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V0A4Q9HBG4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V0A4Q9HBG4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V0A4Q9HBG4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V0A4Q9HBG4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V0A4Q9HBG4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.38■□□□□ 0.85
ATP6V0A4Q9HBG4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V0A4Q9HBG4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.38■□□□□ 0.85
ATP6V0A4Q9HBG4 MIR662-201ENST00000384847 95 ntBASIC20.38■□□□□ 0.85
ATP6V0A4Q9HBG4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
ATP6V0A4Q9HBG4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.38■□□□□ 0.85
ATP6V0A4Q9HBG4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.38■□□□□ 0.85
ATP6V0A4Q9HBG4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V0A4Q9HBG4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ATP6V0A4Q9HBG4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.38■□□□□ 0.85
ATP6V0A4Q9HBG4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V0A4Q9HBG4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ATP6V0A4Q9HBG4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A4Q9HBG4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP6V0A4Q9HBG4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A4Q9HBG4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP6V0A4Q9HBG4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A4Q9HBG4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A4Q9HBG4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A4Q9HBG4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A4Q9HBG4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
ATP6V0A4Q9HBG4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.37■□□□□ 0.85
ATP6V0A4Q9HBG4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.37■□□□□ 0.85
ATP6V0A4Q9HBG4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
ATP6V0A4Q9HBG4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP6V0A4Q9HBG4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.37■□□□□ 0.85
ATP6V0A4Q9HBG4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
ATP6V0A4Q9HBG4 AC011498.5-201ENST00000592027 486 ntBASIC20.37■□□□□ 0.85
ATP6V0A4Q9HBG4 AC092119.3-201ENST00000612618 583 ntBASIC20.37■□□□□ 0.85
ATP6V0A4Q9HBG4 NPAP1P7-201ENST00000613027 823 ntBASIC20.37■□□□□ 0.85
ATP6V0A4Q9HBG4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
ATP6V0A4Q9HBG4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.37■□□□□ 0.85
ATP6V0A4Q9HBG4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.37■□□□□ 0.85
ATP6V0A4Q9HBG4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A4Q9HBG4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A4Q9HBG4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A4Q9HBG4 AL162741.1-201ENST00000565563 1558 ntBASIC20.37■□□□□ 0.85
ATP6V0A4Q9HBG4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0A4Q9HBG4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP6V0A4Q9HBG4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.36■□□□□ 0.85
ATP6V0A4Q9HBG4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6V0A4Q9HBG4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
ATP6V0A4Q9HBG4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.36■□□□□ 0.85
ATP6V0A4Q9HBG4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6V0A4Q9HBG4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6V0A4Q9HBG4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms