Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC22.58■■□□□ 1.2
UPF2Q9HAU5 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 RCC2P3-201ENST00000418112 1537 ntBASIC22.57■■□□□ 1.2
UPF2Q9HAU5 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 PTPA-216ENST00000432651 857 ntTSL 2 BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
UPF2Q9HAU5 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
UPF2Q9HAU5 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
UPF2Q9HAU5 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC22.56■■□□□ 1.2
UPF2Q9HAU5 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UPF2Q9HAU5 SIRPAP1-201ENST00000448467 1770 ntBASIC22.56■■□□□ 1.2
UPF2Q9HAU5 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UPF2Q9HAU5 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC22.56■■□□□ 1.2
UPF2Q9HAU5 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UPF2Q9HAU5 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
UPF2Q9HAU5 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC22.56■■□□□ 1.2
UPF2Q9HAU5 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
UPF2Q9HAU5 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC22.56■■□□□ 1.2
UPF2Q9HAU5 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.56■■□□□ 1.2
UPF2Q9HAU5 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC22.56■■□□□ 1.2
UPF2Q9HAU5 AC098934.4-201ENST00000564127 592 ntBASIC22.56■■□□□ 1.2
UPF2Q9HAU5 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC22.56■■□□□ 1.2
UPF2Q9HAU5 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
UPF2Q9HAU5 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC22.56■■□□□ 1.2
UPF2Q9HAU5 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UPF2Q9HAU5 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC22.56■■□□□ 1.2
UPF2Q9HAU5 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
UPF2Q9HAU5 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UPF2Q9HAU5 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
UPF2Q9HAU5 AC139713.2-201ENST00000641328 2723 ntBASIC22.56■■□□□ 1.2
UPF2Q9HAU5 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
UPF2Q9HAU5 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC22.56■■□□□ 1.2
UPF2Q9HAU5 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC22.56■■□□□ 1.2
UPF2Q9HAU5 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
UPF2Q9HAU5 HTR7P1-201ENST00000538670 1336 ntBASIC22.56■■□□□ 1.2
UPF2Q9HAU5 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
UPF2Q9HAU5 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
UPF2Q9HAU5 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
UPF2Q9HAU5 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC22.55■■□□□ 1.2
UPF2Q9HAU5 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC22.55■■□□□ 1.2
UPF2Q9HAU5 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
UPF2Q9HAU5 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC22.55■■□□□ 1.2
UPF2Q9HAU5 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
UPF2Q9HAU5 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
UPF2Q9HAU5 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC22.55■■□□□ 1.2
UPF2Q9HAU5 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC22.55■■□□□ 1.2
UPF2Q9HAU5 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
UPF2Q9HAU5 AC131212.4-201ENST00000623606 975 ntBASIC22.55■■□□□ 1.2
UPF2Q9HAU5 AC133041.1-202ENST00000642053 222 ntBASIC22.55■■□□□ 1.2
UPF2Q9HAU5 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
UPF2Q9HAU5 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
UPF2Q9HAU5 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
UPF2Q9HAU5 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
UPF2Q9HAU5 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
UPF2Q9HAU5 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC22.55■■□□□ 1.2
UPF2Q9HAU5 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
UPF2Q9HAU5 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
UPF2Q9HAU5 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
UPF2Q9HAU5 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
UPF2Q9HAU5 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
UPF2Q9HAU5 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
UPF2Q9HAU5 AC012313.1-201ENST00000593393 3059 ntBASIC22.54■■□□□ 1.2
UPF2Q9HAU5 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
UPF2Q9HAU5 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
UPF2Q9HAU5 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
UPF2Q9HAU5 CEP83-AS1-201ENST00000623122 2482 ntBASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms