Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BRD9Q9H8M2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.96■□□□□ 0.63
BRD9Q9H8M2 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRD9Q9H8M2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRD9Q9H8M2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRD9Q9H8M2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.95■□□□□ 0.62
BRD9Q9H8M2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.95■□□□□ 0.62
BRD9Q9H8M2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRD9Q9H8M2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BRD9Q9H8M2 AL161938.1-201ENST00000569833 2180 ntBASIC18.95■□□□□ 0.62
BRD9Q9H8M2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BRD9Q9H8M2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.95■□□□□ 0.62
BRD9Q9H8M2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRD9Q9H8M2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BRD9Q9H8M2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRD9Q9H8M2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
BRD9Q9H8M2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
BRD9Q9H8M2 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.95■□□□□ 0.62
BRD9Q9H8M2 AF238378.1-201ENST00000526806 358 ntBASIC18.95■□□□□ 0.62
BRD9Q9H8M2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.95■□□□□ 0.62
BRD9Q9H8M2 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
BRD9Q9H8M2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.95■□□□□ 0.62
BRD9Q9H8M2 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
BRD9Q9H8M2 AC068587.9-201ENST00000641814 219 ntBASIC18.95■□□□□ 0.62
BRD9Q9H8M2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRD9Q9H8M2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
BRD9Q9H8M2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.95■□□□□ 0.62
BRD9Q9H8M2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
BRD9Q9H8M2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
BRD9Q9H8M2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BRD9Q9H8M2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRD9Q9H8M2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRD9Q9H8M2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BRD9Q9H8M2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRD9Q9H8M2 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
BRD9Q9H8M2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRD9Q9H8M2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRD9Q9H8M2 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRD9Q9H8M2 Z98044.1-201ENST00000632503 1764 ntBASIC18.94■□□□□ 0.62
BRD9Q9H8M2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRD9Q9H8M2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRD9Q9H8M2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
BRD9Q9H8M2 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.94■□□□□ 0.62
BRD9Q9H8M2 TSPY12P-201ENST00000421279 868 ntBASIC18.94■□□□□ 0.62
BRD9Q9H8M2 AC091607.1-201ENST00000490318 1060 ntBASIC18.94■□□□□ 0.62
BRD9Q9H8M2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.94■□□□□ 0.62
BRD9Q9H8M2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.94■□□□□ 0.62
BRD9Q9H8M2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
BRD9Q9H8M2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRD9Q9H8M2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRD9Q9H8M2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.94■□□□□ 0.62
BRD9Q9H8M2 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRD9Q9H8M2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.94■□□□□ 0.62
BRD9Q9H8M2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRD9Q9H8M2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRD9Q9H8M2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRD9Q9H8M2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.94■□□□□ 0.62
BRD9Q9H8M2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
BRD9Q9H8M2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
BRD9Q9H8M2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.93■□□□□ 0.62
BRD9Q9H8M2 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.93■□□□□ 0.62
BRD9Q9H8M2 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRD9Q9H8M2 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRD9Q9H8M2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
BRD9Q9H8M2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
BRD9Q9H8M2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BRD9Q9H8M2 POM121L3P-201ENST00000419331 1163 ntBASIC18.93■□□□□ 0.62
BRD9Q9H8M2 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
BRD9Q9H8M2 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRD9Q9H8M2 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.93■□□□□ 0.62
BRD9Q9H8M2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.93■□□□□ 0.62
BRD9Q9H8M2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.93■□□□□ 0.62
BRD9Q9H8M2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
BRD9Q9H8M2 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.93■□□□□ 0.62
BRD9Q9H8M2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRD9Q9H8M2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRD9Q9H8M2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.93■□□□□ 0.62
BRD9Q9H8M2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
BRD9Q9H8M2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRD9Q9H8M2 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
BRD9Q9H8M2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRD9Q9H8M2 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.92■□□□□ 0.62
BRD9Q9H8M2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRD9Q9H8M2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
BRD9Q9H8M2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRD9Q9H8M2 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRD9Q9H8M2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.92■□□□□ 0.62
BRD9Q9H8M2 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
BRD9Q9H8M2 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRD9Q9H8M2 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
BRD9Q9H8M2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
BRD9Q9H8M2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRD9Q9H8M2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
BRD9Q9H8M2 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRD9Q9H8M2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.92■□□□□ 0.62
BRD9Q9H8M2 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRD9Q9H8M2 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
BRD9Q9H8M2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.92■□□□□ 0.62
BRD9Q9H8M2 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.92■□□□□ 0.62
BRD9Q9H8M2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms