Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
BCAS3Q9H6U6 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BCAS3Q9H6U6 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BCAS3Q9H6U6 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BCAS3Q9H6U6 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.63■□□□□ 0.89
BCAS3Q9H6U6 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.63■□□□□ 0.89
BCAS3Q9H6U6 AL845331.1-201ENST00000424978 1190 ntBASIC20.63■□□□□ 0.89
BCAS3Q9H6U6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.63■□□□□ 0.89
BCAS3Q9H6U6 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
BCAS3Q9H6U6 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.63■□□□□ 0.89
BCAS3Q9H6U6 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.63■□□□□ 0.89
BCAS3Q9H6U6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.63■□□□□ 0.89
BCAS3Q9H6U6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.63■□□□□ 0.89
BCAS3Q9H6U6 AP005901.3-202ENST00000581653 237 ntBASIC20.63■□□□□ 0.89
BCAS3Q9H6U6 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.63■□□□□ 0.89
BCAS3Q9H6U6 AC004263.2-201ENST00000617183 678 ntBASIC20.63■□□□□ 0.89
BCAS3Q9H6U6 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BCAS3Q9H6U6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BCAS3Q9H6U6 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BCAS3Q9H6U6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.63■□□□□ 0.89
BCAS3Q9H6U6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BCAS3Q9H6U6 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
BCAS3Q9H6U6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
BCAS3Q9H6U6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.63■□□□□ 0.89
BCAS3Q9H6U6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 AC126763.1-201ENST00000552015 2118 ntBASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 AC124864.1-201ENST00000623408 392 ntBASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 MYLKP1-201ENST00000509077 1580 ntBASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.62■□□□□ 0.89
BCAS3Q9H6U6 AL353692.3-201ENST00000407031 1396 ntBASIC20.61■□□□□ 0.89
BCAS3Q9H6U6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BCAS3Q9H6U6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BCAS3Q9H6U6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BCAS3Q9H6U6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BCAS3Q9H6U6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
BCAS3Q9H6U6 AP000593.1-201ENST00000393668 712 ntBASIC20.61■□□□□ 0.89
BCAS3Q9H6U6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.61■□□□□ 0.89
BCAS3Q9H6U6 AC026396.1-201ENST00000419388 421 ntBASIC20.61■□□□□ 0.89
BCAS3Q9H6U6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.61■□□□□ 0.89
BCAS3Q9H6U6 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BCAS3Q9H6U6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.61■□□□□ 0.89
BCAS3Q9H6U6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.61■□□□□ 0.89
BCAS3Q9H6U6 RN7SL510P-201ENST00000581311 263 ntBASIC20.61■□□□□ 0.89
BCAS3Q9H6U6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BCAS3Q9H6U6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
BCAS3Q9H6U6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BCAS3Q9H6U6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.61■□□□□ 0.89
BCAS3Q9H6U6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BCAS3Q9H6U6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
BCAS3Q9H6U6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.61■□□□□ 0.89
BCAS3Q9H6U6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.61■□□□□ 0.89
BCAS3Q9H6U6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
BCAS3Q9H6U6 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BCAS3Q9H6U6 LINC00167-201ENST00000530583 1419 ntBASIC20.61■□□□□ 0.89
BCAS3Q9H6U6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.61■□□□□ 0.89
BCAS3Q9H6U6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
BCAS3Q9H6U6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.6■□□□□ 0.89
BCAS3Q9H6U6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.6■□□□□ 0.89
BCAS3Q9H6U6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
BCAS3Q9H6U6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BCAS3Q9H6U6 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BCAS3Q9H6U6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BCAS3Q9H6U6 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BCAS3Q9H6U6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
BCAS3Q9H6U6 FOSL1P1-201ENST00000511041 816 ntBASIC20.6■□□□□ 0.89
BCAS3Q9H6U6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BCAS3Q9H6U6 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BCAS3Q9H6U6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BCAS3Q9H6U6 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
BCAS3Q9H6U6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.6■□□□□ 0.89
BCAS3Q9H6U6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
BCAS3Q9H6U6 WIZP1-201ENST00000531444 2299 ntBASIC20.6■□□□□ 0.89
BCAS3Q9H6U6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BCAS3Q9H6U6 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms