Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AC114341.1-201ENST00000618070 349 ntBASIC21.12■□□□□ 0.97
RPAP3Q9H6T3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RPAP3Q9H6T3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPAP3Q9H6T3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPAP3Q9H6T3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
RPAP3Q9H6T3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPAP3Q9H6T3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPAP3Q9H6T3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RPAP3Q9H6T3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPAP3Q9H6T3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RPAP3Q9H6T3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPAP3Q9H6T3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RPAP3Q9H6T3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPAP3Q9H6T3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.11■□□□□ 0.97
RPAP3Q9H6T3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RPAP3Q9H6T3 PENK-208ENST00000523051 772 ntTSL 5 BASIC21.11■□□□□ 0.97
RPAP3Q9H6T3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.11■□□□□ 0.97
RPAP3Q9H6T3 AC005336.2-201ENST00000593183 939 ntBASIC21.11■□□□□ 0.97
RPAP3Q9H6T3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC21.11■□□□□ 0.97
RPAP3Q9H6T3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RPAP3Q9H6T3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.11■□□□□ 0.97
RPAP3Q9H6T3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.11■□□□□ 0.97
RPAP3Q9H6T3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RPAP3Q9H6T3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
RPAP3Q9H6T3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RPAP3Q9H6T3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPAP3Q9H6T3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RPAP3Q9H6T3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPAP3Q9H6T3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.1■□□□□ 0.97
RPAP3Q9H6T3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPAP3Q9H6T3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPAP3Q9H6T3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.1■□□□□ 0.97
RPAP3Q9H6T3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPAP3Q9H6T3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPAP3Q9H6T3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.1■□□□□ 0.97
RPAP3Q9H6T3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.1■□□□□ 0.97
RPAP3Q9H6T3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPAP3Q9H6T3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPAP3Q9H6T3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPAP3Q9H6T3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPAP3Q9H6T3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC21.1■□□□□ 0.97
RPAP3Q9H6T3 AC068472.1-201ENST00000474589 881 ntBASIC21.1■□□□□ 0.97
RPAP3Q9H6T3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.1■□□□□ 0.97
RPAP3Q9H6T3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RPAP3Q9H6T3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
RPAP3Q9H6T3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPAP3Q9H6T3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC21.1■□□□□ 0.97
RPAP3Q9H6T3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RPAP3Q9H6T3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.1■□□□□ 0.97
RPAP3Q9H6T3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.1■□□□□ 0.97
RPAP3Q9H6T3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.09■□□□□ 0.97
RPAP3Q9H6T3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPAP3Q9H6T3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPAP3Q9H6T3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RPAP3Q9H6T3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RPAP3Q9H6T3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPAP3Q9H6T3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RPAP3Q9H6T3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RPAP3Q9H6T3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPAP3Q9H6T3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPAP3Q9H6T3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
RPAP3Q9H6T3 MOK-208ENST00000519058 917 ntTSL 2 BASIC21.09■□□□□ 0.97
RPAP3Q9H6T3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC21.09■□□□□ 0.97
RPAP3Q9H6T3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RPAP3Q9H6T3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
RPAP3Q9H6T3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPAP3Q9H6T3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RPAP3Q9H6T3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.09■□□□□ 0.97
RPAP3Q9H6T3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.09■□□□□ 0.97
RPAP3Q9H6T3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPAP3Q9H6T3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.09■□□□□ 0.97
RPAP3Q9H6T3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPAP3Q9H6T3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
RPAP3Q9H6T3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPAP3Q9H6T3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPAP3Q9H6T3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.08■□□□□ 0.97
RPAP3Q9H6T3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.08■□□□□ 0.97
RPAP3Q9H6T3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPAP3Q9H6T3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPAP3Q9H6T3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPAP3Q9H6T3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPAP3Q9H6T3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RPAP3Q9H6T3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.08■□□□□ 0.97
RPAP3Q9H6T3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
RPAP3Q9H6T3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RPAP3Q9H6T3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC21.08■□□□□ 0.97
RPAP3Q9H6T3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.08■□□□□ 0.97
RPAP3Q9H6T3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.08■□□□□ 0.97
RPAP3Q9H6T3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC21.08■□□□□ 0.97
RPAP3Q9H6T3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.08■□□□□ 0.97
RPAP3Q9H6T3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC21.08■□□□□ 0.97
RPAP3Q9H6T3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.08■□□□□ 0.97
RPAP3Q9H6T3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
RPAP3Q9H6T3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPAP3Q9H6T3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.08■□□□□ 0.96
RPAP3Q9H6T3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPAP3Q9H6T3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPAP3Q9H6T3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RPAP3Q9H6T3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RPAP3Q9H6T3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms