Protein–RNA interactions for Protein: Q9H2X0

CHRD, Chordin, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDQ9H2X0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CHRDQ9H2X0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRDQ9H2X0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRDQ9H2X0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRDQ9H2X0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRDQ9H2X0 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRDQ9H2X0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRDQ9H2X0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRDQ9H2X0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRDQ9H2X0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.38■□□□□ 0.53
CHRDQ9H2X0 RPSAP43-201ENST00000402237 625 ntBASIC18.38■□□□□ 0.53
CHRDQ9H2X0 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.38■□□□□ 0.53
CHRDQ9H2X0 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.38■□□□□ 0.53
CHRDQ9H2X0 GPX1P2-201ENST00000429271 606 ntBASIC18.38■□□□□ 0.53
CHRDQ9H2X0 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
CHRDQ9H2X0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.38■□□□□ 0.53
CHRDQ9H2X0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CHRDQ9H2X0 AC010327.4-202ENST00000591484 748 ntBASIC18.38■□□□□ 0.53
CHRDQ9H2X0 AL139424.1-201ENST00000607572 797 ntBASIC18.38■□□□□ 0.53
CHRDQ9H2X0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRDQ9H2X0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRDQ9H2X0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CHRDQ9H2X0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRDQ9H2X0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRDQ9H2X0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRDQ9H2X0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRDQ9H2X0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CHRDQ9H2X0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRDQ9H2X0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRDQ9H2X0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRDQ9H2X0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRDQ9H2X0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHRDQ9H2X0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.37■□□□□ 0.53
CHRDQ9H2X0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRDQ9H2X0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.37■□□□□ 0.53
CHRDQ9H2X0 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.37■□□□□ 0.53
CHRDQ9H2X0 PMS2P2-201ENST00000425039 1128 ntBASIC18.37■□□□□ 0.53
CHRDQ9H2X0 ABCD1P5-201ENST00000445663 754 ntBASIC18.37■□□□□ 0.53
CHRDQ9H2X0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.37■□□□□ 0.53
CHRDQ9H2X0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHRDQ9H2X0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.37■□□□□ 0.53
CHRDQ9H2X0 AP001160.2-201ENST00000596071 487 ntBASIC18.37■□□□□ 0.53
CHRDQ9H2X0 AL355385.1-201ENST00000606123 409 ntBASIC18.37■□□□□ 0.53
CHRDQ9H2X0 Z83851.2-201ENST00000609564 659 ntBASIC18.37■□□□□ 0.53
CHRDQ9H2X0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHRDQ9H2X0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.37■□□□□ 0.53
CHRDQ9H2X0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRDQ9H2X0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHRDQ9H2X0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CHRDQ9H2X0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRDQ9H2X0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.37■□□□□ 0.53
CHRDQ9H2X0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CHRDQ9H2X0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRDQ9H2X0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHRDQ9H2X0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHRDQ9H2X0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRDQ9H2X0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRDQ9H2X0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRDQ9H2X0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHRDQ9H2X0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRDQ9H2X0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
CHRDQ9H2X0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHRDQ9H2X0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRDQ9H2X0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHRDQ9H2X0 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHRDQ9H2X0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRDQ9H2X0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRDQ9H2X0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.36■□□□□ 0.53
CHRDQ9H2X0 MTMR9LP-203ENST00000426597 1545 ntBASIC18.36■□□□□ 0.53
CHRDQ9H2X0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.36■□□□□ 0.53
CHRDQ9H2X0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.36■□□□□ 0.53
CHRDQ9H2X0 KRT18P3-201ENST00000451602 1288 ntBASIC18.36■□□□□ 0.53
CHRDQ9H2X0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHRDQ9H2X0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRDQ9H2X0 AC092910.1-201ENST00000482027 1129 ntBASIC18.36■□□□□ 0.53
CHRDQ9H2X0 OR7E14P-202ENST00000530490 1290 ntBASIC18.36■□□□□ 0.53
CHRDQ9H2X0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CHRDQ9H2X0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRDQ9H2X0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHRDQ9H2X0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.36■□□□□ 0.53
CHRDQ9H2X0 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.36■□□□□ 0.53
CHRDQ9H2X0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRDQ9H2X0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHRDQ9H2X0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRDQ9H2X0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CHRDQ9H2X0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CHRDQ9H2X0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRDQ9H2X0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.35■□□□□ 0.53
CHRDQ9H2X0 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.35■□□□□ 0.53
CHRDQ9H2X0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRDQ9H2X0 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRDQ9H2X0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRDQ9H2X0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHRDQ9H2X0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CHRDQ9H2X0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CHRDQ9H2X0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CHRDQ9H2X0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.35■□□□□ 0.53
CHRDQ9H2X0 YBX2P1-201ENST00000394192 760 ntBASIC18.35■□□□□ 0.53
CHRDQ9H2X0 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHRDQ9H2X0 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms