Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF38Q9H0F5 AC012615.1-201ENST00000565797 1299 ntBASIC19.01■□□□□ 0.63
RNF38Q9H0F5 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF38Q9H0F5 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF38Q9H0F5 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.01■□□□□ 0.63
RNF38Q9H0F5 AC233702.3-201ENST00000578656 1387 ntBASIC19.01■□□□□ 0.63
RNF38Q9H0F5 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF38Q9H0F5 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF38Q9H0F5 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19■□□□□ 0.63
RNF38Q9H0F5 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF38Q9H0F5 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF38Q9H0F5 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19■□□□□ 0.63
RNF38Q9H0F5 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF38Q9H0F5 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF38Q9H0F5 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RNF38Q9H0F5 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF38Q9H0F5 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF38Q9H0F5 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF38Q9H0F5 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19■□□□□ 0.63
RNF38Q9H0F5 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RNF38Q9H0F5 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RNF38Q9H0F5 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RNF38Q9H0F5 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF38Q9H0F5 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RNF38Q9H0F5 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF38Q9H0F5 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF38Q9H0F5 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RNF38Q9H0F5 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF38Q9H0F5 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF38Q9H0F5 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RNF38Q9H0F5 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RNF38Q9H0F5 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF38Q9H0F5 AL020996.1-203ENST00000536896 2307 ntBASIC19■□□□□ 0.63
RNF38Q9H0F5 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF38Q9H0F5 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19■□□□□ 0.63
RNF38Q9H0F5 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
RNF38Q9H0F5 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RNF38Q9H0F5 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF38Q9H0F5 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF38Q9H0F5 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF38Q9H0F5 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF38Q9H0F5 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF38Q9H0F5 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF38Q9H0F5 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF38Q9H0F5 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF38Q9H0F5 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF38Q9H0F5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF38Q9H0F5 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
RNF38Q9H0F5 TPM4P1-201ENST00000436100 807 ntBASIC18.99■□□□□ 0.63
RNF38Q9H0F5 AC091607.1-201ENST00000490318 1060 ntBASIC18.99■□□□□ 0.63
RNF38Q9H0F5 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF38Q9H0F5 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.99■□□□□ 0.63
RNF38Q9H0F5 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.99■□□□□ 0.63
RNF38Q9H0F5 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RNF38Q9H0F5 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF38Q9H0F5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF38Q9H0F5 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF38Q9H0F5 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF38Q9H0F5 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF38Q9H0F5 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF38Q9H0F5 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF38Q9H0F5 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF38Q9H0F5 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF38Q9H0F5 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF38Q9H0F5 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF38Q9H0F5 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF38Q9H0F5 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF38Q9H0F5 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF38Q9H0F5 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RNF38Q9H0F5 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RNF38Q9H0F5 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF38Q9H0F5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF38Q9H0F5 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF38Q9H0F5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF38Q9H0F5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF38Q9H0F5 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF38Q9H0F5 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF38Q9H0F5 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF38Q9H0F5 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF38Q9H0F5 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF38Q9H0F5 TSPY19P-201ENST00000418461 509 ntBASIC18.98■□□□□ 0.63
RNF38Q9H0F5 AL845331.1-201ENST00000424978 1190 ntBASIC18.98■□□□□ 0.63
RNF38Q9H0F5 TSPY18P-201ENST00000441642 509 ntBASIC18.98■□□□□ 0.63
RNF38Q9H0F5 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF38Q9H0F5 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
RNF38Q9H0F5 FOSL1P1-201ENST00000511041 816 ntBASIC18.98■□□□□ 0.63
RNF38Q9H0F5 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.98■□□□□ 0.63
RNF38Q9H0F5 AC074051.2-201ENST00000565115 352 ntBASIC18.98■□□□□ 0.63
RNF38Q9H0F5 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF38Q9H0F5 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF38Q9H0F5 RN7SL510P-201ENST00000581311 263 ntBASIC18.98■□□□□ 0.63
RNF38Q9H0F5 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
RNF38Q9H0F5 AL732292.2-201ENST00000609649 430 ntBASIC18.98■□□□□ 0.63
RNF38Q9H0F5 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF38Q9H0F5 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF38Q9H0F5 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RNF38Q9H0F5 LINC00167-201ENST00000530583 1419 ntBASIC18.98■□□□□ 0.63
RNF38Q9H0F5 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF38Q9H0F5 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF38Q9H0F5 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms