Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXP3Q9BZS1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FOXP3Q9BZS1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19■□□□□ 0.63
FOXP3Q9BZS1 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19■□□□□ 0.63
FOXP3Q9BZS1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19■□□□□ 0.63
FOXP3Q9BZS1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
FOXP3Q9BZS1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXP3Q9BZS1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXP3Q9BZS1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXP3Q9BZS1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXP3Q9BZS1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
FOXP3Q9BZS1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.99■□□□□ 0.63
FOXP3Q9BZS1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXP3Q9BZS1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
FOXP3Q9BZS1 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
FOXP3Q9BZS1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.99■□□□□ 0.63
FOXP3Q9BZS1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.99■□□□□ 0.63
FOXP3Q9BZS1 KRT18P57-201ENST00000443599 1254 ntBASIC18.99■□□□□ 0.63
FOXP3Q9BZS1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
FOXP3Q9BZS1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.99■□□□□ 0.63
FOXP3Q9BZS1 NAPSB-206ENST00000562112 1266 ntBASIC18.99■□□□□ 0.63
FOXP3Q9BZS1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
FOXP3Q9BZS1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.99■□□□□ 0.63
FOXP3Q9BZS1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXP3Q9BZS1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXP3Q9BZS1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXP3Q9BZS1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
FOXP3Q9BZS1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
FOXP3Q9BZS1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXP3Q9BZS1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXP3Q9BZS1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
FOXP3Q9BZS1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXP3Q9BZS1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.98■□□□□ 0.63
FOXP3Q9BZS1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXP3Q9BZS1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
FOXP3Q9BZS1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
FOXP3Q9BZS1 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXP3Q9BZS1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXP3Q9BZS1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.98■□□□□ 0.63
FOXP3Q9BZS1 AC116562.2-201ENST00000507042 360 ntBASIC18.98■□□□□ 0.63
FOXP3Q9BZS1 AL049597.2-201ENST00000565575 961 ntBASIC18.98■□□□□ 0.63
FOXP3Q9BZS1 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXP3Q9BZS1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.98■□□□□ 0.63
FOXP3Q9BZS1 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
FOXP3Q9BZS1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXP3Q9BZS1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
FOXP3Q9BZS1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
FOXP3Q9BZS1 AC134043.2-201ENST00000624206 2238 ntBASIC18.98■□□□□ 0.63
FOXP3Q9BZS1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXP3Q9BZS1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXP3Q9BZS1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.98■□□□□ 0.63
FOXP3Q9BZS1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXP3Q9BZS1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXP3Q9BZS1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXP3Q9BZS1 LTB4R2-202ENST00000528054 3092 ntBASIC18.97■□□□□ 0.63
FOXP3Q9BZS1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
FOXP3Q9BZS1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.97■□□□□ 0.63
FOXP3Q9BZS1 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.97■□□□□ 0.63
FOXP3Q9BZS1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXP3Q9BZS1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXP3Q9BZS1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
FOXP3Q9BZS1 LINC00896-202ENST00000609602 2128 ntBASIC18.97■□□□□ 0.63
FOXP3Q9BZS1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
FOXP3Q9BZS1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXP3Q9BZS1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXP3Q9BZS1 ARMC10P1-201ENST00000313754 855 ntBASIC18.97■□□□□ 0.63
FOXP3Q9BZS1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXP3Q9BZS1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.97■□□□□ 0.63
FOXP3Q9BZS1 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.97■□□□□ 0.63
FOXP3Q9BZS1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXP3Q9BZS1 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.97■□□□□ 0.63
FOXP3Q9BZS1 FITM1-202ENST00000559294 800 ntBASIC18.97■□□□□ 0.63
FOXP3Q9BZS1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.97■□□□□ 0.63
FOXP3Q9BZS1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.97■□□□□ 0.63
FOXP3Q9BZS1 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXP3Q9BZS1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
FOXP3Q9BZS1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.97■□□□□ 0.63
FOXP3Q9BZS1 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXP3Q9BZS1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXP3Q9BZS1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXP3Q9BZS1 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXP3Q9BZS1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXP3Q9BZS1 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXP3Q9BZS1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXP3Q9BZS1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXP3Q9BZS1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXP3Q9BZS1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FOXP3Q9BZS1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.96■□□□□ 0.63
FOXP3Q9BZS1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXP3Q9BZS1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FOXP3Q9BZS1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.96■□□□□ 0.63
FOXP3Q9BZS1 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXP3Q9BZS1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
FOXP3Q9BZS1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FOXP3Q9BZS1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXP3Q9BZS1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
FOXP3Q9BZS1 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
FOXP3Q9BZS1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FOXP3Q9BZS1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.96■□□□□ 0.63
FOXP3Q9BZS1 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms