Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 RCN1P2-201ENST00000398357 915 ntBASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 DPP3P2-201ENST00000416030 1696 ntBASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3Q9BZ76 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 AL162377.1-201ENST00000618844 1793 ntBASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.46■□□□□ 0.39
CNTNAP3Q9BZ76 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.45■□□□□ 0.38
CNTNAP3Q9BZ76 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
CNTNAP3Q9BZ76 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP3Q9BZ76 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP3Q9BZ76 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP3Q9BZ76 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP3Q9BZ76 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP3Q9BZ76 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP3Q9BZ76 AC009947.1-201ENST00000444350 727 ntBASIC17.45■□□□□ 0.38
CNTNAP3Q9BZ76 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.45■□□□□ 0.38
CNTNAP3Q9BZ76 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CNTNAP3Q9BZ76 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.45■□□□□ 0.38
CNTNAP3Q9BZ76 AC004449.1-201ENST00000564240 433 ntBASIC17.45■□□□□ 0.38
CNTNAP3Q9BZ76 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.45■□□□□ 0.38
CNTNAP3Q9BZ76 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP3Q9BZ76 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP3Q9BZ76 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP3Q9BZ76 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP3Q9BZ76 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CNTNAP3Q9BZ76 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CNTNAP3Q9BZ76 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.45■□□□□ 0.38
CNTNAP3Q9BZ76 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CNTNAP3Q9BZ76 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 AP002414.3-201ENST00000589352 1468 ntBASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNTNAP3Q9BZ76 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms