Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 AC006128.1-201ENST00000624704 1661 ntBASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 UGT1A2P-201ENST00000454886 866 ntBASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 AC092902.6-201ENST00000641783 218 ntBASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRFN3Q9BTN0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.25■□□□□ 0.51
LRFN3Q9BTN0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRFN3Q9BTN0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRFN3Q9BTN0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.25■□□□□ 0.51
LRFN3Q9BTN0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRFN3Q9BTN0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRFN3Q9BTN0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRFN3Q9BTN0 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
LRFN3Q9BTN0 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.25■□□□□ 0.51
LRFN3Q9BTN0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LRFN3Q9BTN0 ARSEP1-201ENST00000420443 635 ntBASIC18.25■□□□□ 0.51
LRFN3Q9BTN0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.25■□□□□ 0.51
LRFN3Q9BTN0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.25■□□□□ 0.51
LRFN3Q9BTN0 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.25■□□□□ 0.51
LRFN3Q9BTN0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRFN3Q9BTN0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRFN3Q9BTN0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
LRFN3Q9BTN0 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.25■□□□□ 0.51
LRFN3Q9BTN0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRFN3Q9BTN0 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRFN3Q9BTN0 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 NME2P1-201ENST00000426182 414 ntBASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 AC027307.3-201ENST00000594262 1100 ntBASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRFN3Q9BTN0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRFN3Q9BTN0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRFN3Q9BTN0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.23■□□□□ 0.51
LRFN3Q9BTN0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRFN3Q9BTN0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LRFN3Q9BTN0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRFN3Q9BTN0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRFN3Q9BTN0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRFN3Q9BTN0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms