Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN18Q99952 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21■□□□□ 0.95
PTPN18Q99952 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN18Q99952 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.99■□□□□ 0.95
PTPN18Q99952 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN18Q99952 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN18Q99952 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.99■□□□□ 0.95
PTPN18Q99952 AL024508.2-201ENST00000607749 1894 ntBASIC20.99■□□□□ 0.95
PTPN18Q99952 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN18Q99952 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN18Q99952 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.99■□□□□ 0.95
PTPN18Q99952 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.99■□□□□ 0.95
PTPN18Q99952 AC002347.1-201ENST00000569543 541 ntBASIC20.99■□□□□ 0.95
PTPN18Q99952 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN18Q99952 AC008687.5-201ENST00000593746 558 ntBASIC20.99■□□□□ 0.95
PTPN18Q99952 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN18Q99952 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN18Q99952 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN18Q99952 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN18Q99952 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN18Q99952 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
PTPN18Q99952 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PTPN18Q99952 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.98■□□□□ 0.95
PTPN18Q99952 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN18Q99952 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN18Q99952 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN18Q99952 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN18Q99952 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.98■□□□□ 0.95
PTPN18Q99952 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.98■□□□□ 0.95
PTPN18Q99952 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PTPN18Q99952 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN18Q99952 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN18Q99952 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN18Q99952 AC009102.3-201ENST00000623118 1491 ntBASIC20.98■□□□□ 0.95
PTPN18Q99952 KRT18P28-201ENST00000453838 1332 ntBASIC20.98■□□□□ 0.95
PTPN18Q99952 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.98■□□□□ 0.95
PTPN18Q99952 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN18Q99952 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN18Q99952 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PTPN18Q99952 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN18Q99952 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN18Q99952 SDHAP2-201ENST00000455183 2001 ntBASIC20.97■□□□□ 0.95
PTPN18Q99952 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN18Q99952 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN18Q99952 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN18Q99952 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.97■□□□□ 0.95
PTPN18Q99952 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN18Q99952 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.97■□□□□ 0.95
PTPN18Q99952 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN18Q99952 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN18Q99952 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN18Q99952 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.97■□□□□ 0.95
PTPN18Q99952 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.97■□□□□ 0.95
PTPN18Q99952 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.97■□□□□ 0.95
PTPN18Q99952 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN18Q99952 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.97■□□□□ 0.95
PTPN18Q99952 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN18Q99952 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN18Q99952 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.97■□□□□ 0.95
PTPN18Q99952 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN18Q99952 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN18Q99952 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.96■□□□□ 0.95
PTPN18Q99952 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN18Q99952 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN18Q99952 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.96■□□□□ 0.95
PTPN18Q99952 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN18Q99952 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.96■□□□□ 0.95
PTPN18Q99952 AC211486.1-202ENST00000416371 468 ntBASIC20.96■□□□□ 0.95
PTPN18Q99952 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.96■□□□□ 0.95
PTPN18Q99952 AP006288.1-201ENST00000446065 395 ntBASIC20.96■□□□□ 0.95
PTPN18Q99952 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.96■□□□□ 0.95
PTPN18Q99952 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.96■□□□□ 0.95
PTPN18Q99952 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.96■□□□□ 0.95
PTPN18Q99952 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.96■□□□□ 0.95
PTPN18Q99952 AC211476.1-201ENST00000503899 468 ntBASIC20.96■□□□□ 0.95
PTPN18Q99952 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.96■□□□□ 0.95
PTPN18Q99952 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.96■□□□□ 0.95
PTPN18Q99952 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.96■□□□□ 0.95
PTPN18Q99952 MTDHP5-201ENST00000598980 586 ntBASIC20.96■□□□□ 0.95
PTPN18Q99952 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.96■□□□□ 0.95
PTPN18Q99952 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN18Q99952 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PTPN18Q99952 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
PTPN18Q99952 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
PTPN18Q99952 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN18Q99952 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PTPN18Q99952 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN18Q99952 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN18Q99952 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.95■□□□□ 0.94
PTPN18Q99952 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN18Q99952 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PTPN18Q99952 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN18Q99952 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN18Q99952 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN18Q99952 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PTPN18Q99952 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.95■□□□□ 0.94
PTPN18Q99952 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN18Q99952 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC20.95■□□□□ 0.94
PTPN18Q99952 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.95■□□□□ 0.94
PTPN18Q99952 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms