Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC24.35■■□□□ 1.49
ABCA3Q99758 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
ABCA3Q99758 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
ABCA3Q99758 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC24.35■■□□□ 1.49
ABCA3Q99758 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC24.35■■□□□ 1.49
ABCA3Q99758 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
ABCA3Q99758 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC24.35■■□□□ 1.49
ABCA3Q99758 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
ABCA3Q99758 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC24.35■■□□□ 1.49
ABCA3Q99758 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
ABCA3Q99758 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ABCA3Q99758 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
ABCA3Q99758 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ABCA3Q99758 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ABCA3Q99758 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC24.35■■□□□ 1.49
ABCA3Q99758 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
ABCA3Q99758 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC24.35■■□□□ 1.49
ABCA3Q99758 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC24.35■■□□□ 1.49
ABCA3Q99758 MIR1199-201ENST00000621445 119 ntBASIC24.35■■□□□ 1.49
ABCA3Q99758 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ABCA3Q99758 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
ABCA3Q99758 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ABCA3Q99758 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
ABCA3Q99758 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
ABCA3Q99758 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC24.34■■□□□ 1.49
ABCA3Q99758 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ABCA3Q99758 AC007967.3-201ENST00000434308 558 ntBASIC24.34■■□□□ 1.49
ABCA3Q99758 AC073592.4-201ENST00000623827 446 ntBASIC24.34■■□□□ 1.49
ABCA3Q99758 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ABCA3Q99758 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ABCA3Q99758 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC24.33■■□□□ 1.49
ABCA3Q99758 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC24.33■■□□□ 1.49
ABCA3Q99758 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
ABCA3Q99758 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ABCA3Q99758 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
ABCA3Q99758 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
ABCA3Q99758 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
ABCA3Q99758 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC24.33■■□□□ 1.49
ABCA3Q99758 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC24.33■■□□□ 1.49
ABCA3Q99758 MSRA-206ENST00000521209 814 ntTSL 3 BASIC24.33■■□□□ 1.49
ABCA3Q99758 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
ABCA3Q99758 COX5A-206ENST00000568783 571 ntTSL 3 BASIC24.33■■□□□ 1.49
ABCA3Q99758 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC24.33■■□□□ 1.49
ABCA3Q99758 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
ABCA3Q99758 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
ABCA3Q99758 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC24.33■■□□□ 1.49
ABCA3Q99758 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ABCA3Q99758 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.48
ABCA3Q99758 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC24.33■■□□□ 1.48
ABCA3Q99758 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ABCA3Q99758 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ABCA3Q99758 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
ABCA3Q99758 KRT18P65-201ENST00000439811 1286 ntBASIC24.32■■□□□ 1.48
ABCA3Q99758 AC108073.2-201ENST00000464002 357 ntBASIC24.32■■□□□ 1.48
ABCA3Q99758 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC24.32■■□□□ 1.48
ABCA3Q99758 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC24.32■■□□□ 1.48
ABCA3Q99758 CIPC-205ENST00000555437 566 ntTSL 3 BASIC24.32■■□□□ 1.48
ABCA3Q99758 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC24.32■■□□□ 1.48
ABCA3Q99758 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
ABCA3Q99758 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC24.32■■□□□ 1.48
ABCA3Q99758 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
ABCA3Q99758 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ABCA3Q99758 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
ABCA3Q99758 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
ABCA3Q99758 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC24.32■■□□□ 1.48
ABCA3Q99758 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
ABCA3Q99758 PON3-203ENST00000427422 894 ntTSL 3 BASIC24.32■■□□□ 1.48
ABCA3Q99758 BX005266.1-201ENST00000473402 457 ntBASIC24.32■■□□□ 1.48
ABCA3Q99758 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
ABCA3Q99758 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
ABCA3Q99758 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC24.32■■□□□ 1.48
ABCA3Q99758 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC24.32■■□□□ 1.48
ABCA3Q99758 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC24.32■■□□□ 1.48
ABCA3Q99758 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC24.32■■□□□ 1.48
ABCA3Q99758 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
ABCA3Q99758 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ABCA3Q99758 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ABCA3Q99758 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ABCA3Q99758 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
ABCA3Q99758 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ABCA3Q99758 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
ABCA3Q99758 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ABCA3Q99758 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ABCA3Q99758 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ABCA3Q99758 SIGLEC16-201ENST00000599858 1437 ntBASIC24.31■■□□□ 1.48
ABCA3Q99758 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
ABCA3Q99758 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC24.31■■□□□ 1.48
ABCA3Q99758 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC24.31■■□□□ 1.48
ABCA3Q99758 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC24.31■■□□□ 1.48
ABCA3Q99758 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC24.31■■□□□ 1.48
ABCA3Q99758 KRT18P2-201ENST00000447938 1258 ntBASIC24.31■■□□□ 1.48
ABCA3Q99758 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC24.31■■□□□ 1.48
ABCA3Q99758 AC136632.2-201ENST00000512891 861 ntBASIC24.31■■□□□ 1.48
ABCA3Q99758 RPL28-205ENST00000558131 444 ntTSL 5 BASIC24.31■■□□□ 1.48
ABCA3Q99758 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC24.31■■□□□ 1.48
ABCA3Q99758 AC006557.2-201ENST00000592985 1240 ntBASIC24.31■■□□□ 1.48
ABCA3Q99758 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC24.31■■□□□ 1.48
ABCA3Q99758 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
ABCA3Q99758 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
ABCA3Q99758 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms