Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.9■□□□□ 0.46
PKP4Q99569 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKP4Q99569 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.9■□□□□ 0.46
PKP4Q99569 YBX1P2-201ENST00000489612 999 ntBASIC17.9■□□□□ 0.46
PKP4Q99569 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.9■□□□□ 0.46
PKP4Q99569 MIR3917-201ENST00000580971 93 ntBASIC17.9■□□□□ 0.46
PKP4Q99569 AL031432.5-201ENST00000641059 760 ntBASIC17.9■□□□□ 0.46
PKP4Q99569 AC092865.7-201ENST00000641832 219 ntBASIC17.9■□□□□ 0.46
PKP4Q99569 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PKP4Q99569 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKP4Q99569 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKP4Q99569 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PKP4Q99569 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PKP4Q99569 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PKP4Q99569 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PKP4Q99569 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.89■□□□□ 0.46
PKP4Q99569 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.89■□□□□ 0.46
PKP4Q99569 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PKP4Q99569 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.89■□□□□ 0.46
PKP4Q99569 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
PKP4Q99569 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PKP4Q99569 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PKP4Q99569 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
PKP4Q99569 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.89■□□□□ 0.45
PKP4Q99569 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.89■□□□□ 0.45
PKP4Q99569 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PKP4Q99569 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PKP4Q99569 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PKP4Q99569 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PKP4Q99569 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PKP4Q99569 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.89■□□□□ 0.45
PKP4Q99569 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.89■□□□□ 0.45
PKP4Q99569 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.89■□□□□ 0.45
PKP4Q99569 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.89■□□□□ 0.45
PKP4Q99569 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.89■□□□□ 0.45
PKP4Q99569 RN7SL850P-201ENST00000579959 291 ntBASIC17.89■□□□□ 0.45
PKP4Q99569 AC006011.2-201ENST00000621313 1158 ntBASIC17.89■□□□□ 0.45
PKP4Q99569 AL157888.1-201ENST00000631930 593 ntBASIC17.89■□□□□ 0.45
PKP4Q99569 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PKP4Q99569 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PKP4Q99569 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PKP4Q99569 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PKP4Q99569 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PKP4Q99569 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PKP4Q99569 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PKP4Q99569 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.88■□□□□ 0.45
PKP4Q99569 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.88■□□□□ 0.45
PKP4Q99569 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PKP4Q99569 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PKP4Q99569 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PKP4Q99569 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.88■□□□□ 0.45
PKP4Q99569 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PKP4Q99569 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PKP4Q99569 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PKP4Q99569 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PKP4Q99569 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PKP4Q99569 AC104076.2-201ENST00000448912 469 ntBASIC17.88■□□□□ 0.45
PKP4Q99569 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PKP4Q99569 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PKP4Q99569 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PKP4Q99569 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
PKP4Q99569 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
PKP4Q99569 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.88■□□□□ 0.45
PKP4Q99569 AC009065.1-201ENST00000564055 1225 ntBASIC17.88■□□□□ 0.45
PKP4Q99569 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.88■□□□□ 0.45
PKP4Q99569 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.88■□□□□ 0.45
PKP4Q99569 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.88■□□□□ 0.45
PKP4Q99569 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.88■□□□□ 0.45
PKP4Q99569 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
PKP4Q99569 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PKP4Q99569 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PKP4Q99569 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.87■□□□□ 0.45
PKP4Q99569 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PKP4Q99569 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PKP4Q99569 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PKP4Q99569 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.87■□□□□ 0.45
PKP4Q99569 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.87■□□□□ 0.45
PKP4Q99569 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PKP4Q99569 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.87■□□□□ 0.45
PKP4Q99569 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PKP4Q99569 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.87■□□□□ 0.45
PKP4Q99569 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PKP4Q99569 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PKP4Q99569 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PKP4Q99569 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PKP4Q99569 ESPNP-201ENST00000270691 2015 ntBASIC17.87■□□□□ 0.45
PKP4Q99569 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.87■□□□□ 0.45
PKP4Q99569 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PKP4Q99569 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
PKP4Q99569 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PKP4Q99569 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PKP4Q99569 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PKP4Q99569 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PKP4Q99569 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PKP4Q99569 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PKP4Q99569 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.86■□□□□ 0.45
PKP4Q99569 HCG11-201ENST00000411553 5696 ntBASIC17.86■□□□□ 0.45
PKP4Q99569 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PKP4Q99569 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PKP4Q99569 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms