Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD1Q96PZ7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD1Q96PZ7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.6■□□□□ 0.09
CSMD1Q96PZ7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.6■□□□□ 0.09
CSMD1Q96PZ7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.6■□□□□ 0.09
CSMD1Q96PZ7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CSMD1Q96PZ7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 SNHG9-202ENST00000564014 471 ntBASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 KRT18P27-201ENST00000427733 1299 ntBASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 RNA5SP416-201ENST00000516838 111 ntBASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 AC021087.4-201ENST00000563761 564 ntBASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 SLC25A24-204ENST00000569674 2357 ntBASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.59■□□□□ 0.09
CSMD1Q96PZ7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CSMD1Q96PZ7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CSMD1Q96PZ7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CSMD1Q96PZ7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
CSMD1Q96PZ7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CSMD1Q96PZ7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CSMD1Q96PZ7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.58■□□□□ 0.09
CSMD1Q96PZ7 AC020907.5-201ENST00000624372 1936 ntBASIC15.58■□□□□ 0.09
CSMD1Q96PZ7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CSMD1Q96PZ7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSMD1Q96PZ7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.58■□□□□ 0.08
CSMD1Q96PZ7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CSMD1Q96PZ7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CSMD1Q96PZ7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.58■□□□□ 0.08
CSMD1Q96PZ7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.58■□□□□ 0.08
CSMD1Q96PZ7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSMD1Q96PZ7 AL109659.2-201ENST00000606809 1674 ntBASIC15.58■□□□□ 0.08
CSMD1Q96PZ7 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.58■□□□□ 0.08
CSMD1Q96PZ7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSMD1Q96PZ7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC15.58■□□□□ 0.08
CSMD1Q96PZ7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CSMD1Q96PZ7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.58■□□□□ 0.08
CSMD1Q96PZ7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.58■□□□□ 0.08
CSMD1Q96PZ7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CSMD1Q96PZ7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.58■□□□□ 0.08
CSMD1Q96PZ7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CSMD1Q96PZ7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSMD1Q96PZ7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CSMD1Q96PZ7 HEIH-201ENST00000623091 1652 ntBASIC15.58■□□□□ 0.08
CSMD1Q96PZ7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CSMD1Q96PZ7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
CSMD1Q96PZ7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CSMD1Q96PZ7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CSMD1Q96PZ7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.57■□□□□ 0.08
CSMD1Q96PZ7 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.57■□□□□ 0.08
CSMD1Q96PZ7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CSMD1Q96PZ7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.57■□□□□ 0.08
CSMD1Q96PZ7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSMD1Q96PZ7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSMD1Q96PZ7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
CSMD1Q96PZ7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSMD1Q96PZ7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.57■□□□□ 0.08
CSMD1Q96PZ7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CSMD1Q96PZ7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSMD1Q96PZ7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSMD1Q96PZ7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSMD1Q96PZ7 TP73-AS1-210ENST00000637775 1455 ntBASIC15.57■□□□□ 0.08
CSMD1Q96PZ7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CSMD1Q96PZ7 MEIS3P1-201ENST00000495167 958 ntBASIC15.57■□□□□ 0.08
CSMD1Q96PZ7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSMD1Q96PZ7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSMD1Q96PZ7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms