Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CFAP54Q96N23 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.96■□□□□ 0.47
CFAP54Q96N23 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.96■□□□□ 0.47
CFAP54Q96N23 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CFAP54Q96N23 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CFAP54Q96N23 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CFAP54Q96N23 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CFAP54Q96N23 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CFAP54Q96N23 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CFAP54Q96N23 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CFAP54Q96N23 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CFAP54Q96N23 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.95■□□□□ 0.46
CFAP54Q96N23 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.95■□□□□ 0.46
CFAP54Q96N23 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.95■□□□□ 0.46
CFAP54Q96N23 AC073592.5-201ENST00000624854 528 ntBASIC17.95■□□□□ 0.46
CFAP54Q96N23 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.95■□□□□ 0.46
CFAP54Q96N23 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CFAP54Q96N23 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CFAP54Q96N23 HOXB1-202ENST00000577092 1414 ntBASIC17.95■□□□□ 0.46
CFAP54Q96N23 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CFAP54Q96N23 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.95■□□□□ 0.46
CFAP54Q96N23 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.95■□□□□ 0.46
CFAP54Q96N23 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.95■□□□□ 0.46
CFAP54Q96N23 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CFAP54Q96N23 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.95■□□□□ 0.46
CFAP54Q96N23 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.95■□□□□ 0.46
CFAP54Q96N23 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.95■□□□□ 0.46
CFAP54Q96N23 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.95■□□□□ 0.46
CFAP54Q96N23 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CFAP54Q96N23 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CFAP54Q96N23 AP002414.1-201ENST00000391405 1147 ntBASIC17.95■□□□□ 0.46
CFAP54Q96N23 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CFAP54Q96N23 AL031432.2-201ENST00000566714 459 ntBASIC17.95■□□□□ 0.46
CFAP54Q96N23 AL928711.1-201ENST00000570165 459 ntBASIC17.95■□□□□ 0.46
CFAP54Q96N23 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CFAP54Q96N23 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CFAP54Q96N23 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CFAP54Q96N23 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.94■□□□□ 0.46
CFAP54Q96N23 AC004817.3-201ENST00000602957 2129 ntBASIC17.94■□□□□ 0.46
CFAP54Q96N23 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.94■□□□□ 0.46
CFAP54Q96N23 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CFAP54Q96N23 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CFAP54Q96N23 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CFAP54Q96N23 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CFAP54Q96N23 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CFAP54Q96N23 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.94■□□□□ 0.46
CFAP54Q96N23 AP005018.1-201ENST00000525475 301 ntBASIC17.94■□□□□ 0.46
CFAP54Q96N23 AC069262.1-201ENST00000539058 672 ntBASIC17.94■□□□□ 0.46
CFAP54Q96N23 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.94■□□□□ 0.46
CFAP54Q96N23 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.94■□□□□ 0.46
CFAP54Q96N23 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CFAP54Q96N23 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.94■□□□□ 0.46
CFAP54Q96N23 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CFAP54Q96N23 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CFAP54Q96N23 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CFAP54Q96N23 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CFAP54Q96N23 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.94■□□□□ 0.46
CFAP54Q96N23 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.94■□□□□ 0.46
CFAP54Q96N23 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CFAP54Q96N23 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CFAP54Q96N23 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.94■□□□□ 0.46
CFAP54Q96N23 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.94■□□□□ 0.46
CFAP54Q96N23 AL390955.2-201ENST00000603032 514 ntBASIC17.94■□□□□ 0.46
CFAP54Q96N23 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CFAP54Q96N23 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CFAP54Q96N23 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CFAP54Q96N23 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CFAP54Q96N23 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CFAP54Q96N23 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CFAP54Q96N23 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CFAP54Q96N23 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CFAP54Q96N23 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CFAP54Q96N23 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CFAP54Q96N23 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CFAP54Q96N23 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.93■□□□□ 0.46
CFAP54Q96N23 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.93■□□□□ 0.46
CFAP54Q96N23 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.93■□□□□ 0.46
CFAP54Q96N23 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.93■□□□□ 0.46
CFAP54Q96N23 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CFAP54Q96N23 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CFAP54Q96N23 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CFAP54Q96N23 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CFAP54Q96N23 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CFAP54Q96N23 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CFAP54Q96N23 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.93■□□□□ 0.46
CFAP54Q96N23 MRPL20P1-201ENST00000400819 433 ntBASIC17.93■□□□□ 0.46
CFAP54Q96N23 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.93■□□□□ 0.46
CFAP54Q96N23 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.93■□□□□ 0.46
CFAP54Q96N23 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.93■□□□□ 0.46
CFAP54Q96N23 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.93■□□□□ 0.46
CFAP54Q96N23 AC092902.6-201ENST00000641783 218 ntBASIC17.93■□□□□ 0.46
CFAP54Q96N23 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CFAP54Q96N23 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.93■□□□□ 0.46
CFAP54Q96N23 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CFAP54Q96N23 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CFAP54Q96N23 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CFAP54Q96N23 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.93■□□□□ 0.46
CFAP54Q96N23 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.93■□□□□ 0.46
CFAP54Q96N23 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CFAP54Q96N23 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms