Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.57■□□□□ 0.56
LRRC39Q96DD0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 ABHD17AP1-201ENST00000358206 933 ntBASIC18.57■□□□□ 0.56
LRRC39Q96DD0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LRRC39Q96DD0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC39Q96DD0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC39Q96DD0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC39Q96DD0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC39Q96DD0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.56■□□□□ 0.56
LRRC39Q96DD0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LRRC39Q96DD0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.56■□□□□ 0.56
LRRC39Q96DD0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC39Q96DD0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC39Q96DD0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC39Q96DD0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC39Q96DD0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.56■□□□□ 0.56
LRRC39Q96DD0 UBE2SP1-201ENST00000450587 669 ntBASIC18.56■□□□□ 0.56
LRRC39Q96DD0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.56■□□□□ 0.56
LRRC39Q96DD0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC39Q96DD0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.56■□□□□ 0.56
LRRC39Q96DD0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC39Q96DD0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.56■□□□□ 0.56
LRRC39Q96DD0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.56■□□□□ 0.56
LRRC39Q96DD0 MIR4674-201ENST00000582457 87 ntBASIC18.56■□□□□ 0.56
LRRC39Q96DD0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.56■□□□□ 0.56
LRRC39Q96DD0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC39Q96DD0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LRRC39Q96DD0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC39Q96DD0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC39Q96DD0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC39Q96DD0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LRRC39Q96DD0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC39Q96DD0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.56■□□□□ 0.56
LRRC39Q96DD0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LRRC39Q96DD0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC39Q96DD0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC39Q96DD0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.55■□□□□ 0.56
LRRC39Q96DD0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC39Q96DD0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC39Q96DD0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.55■□□□□ 0.56
LRRC39Q96DD0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.55■□□□□ 0.56
LRRC39Q96DD0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC39Q96DD0 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC39Q96DD0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC39Q96DD0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.55■□□□□ 0.56
LRRC39Q96DD0 CRYGFP-201ENST00000418459 633 ntBASIC18.55■□□□□ 0.56
LRRC39Q96DD0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.55■□□□□ 0.56
LRRC39Q96DD0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC39Q96DD0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.55■□□□□ 0.56
LRRC39Q96DD0 AC009065.1-201ENST00000564055 1225 ntBASIC18.55■□□□□ 0.56
LRRC39Q96DD0 AC233702.5-201ENST00000584107 538 ntBASIC18.55■□□□□ 0.56
LRRC39Q96DD0 REXO1L10P-201ENST00000615707 1290 ntBASIC18.55■□□□□ 0.56
LRRC39Q96DD0 REXO1L12P-201ENST00000622156 912 ntBASIC18.55■□□□□ 0.56
LRRC39Q96DD0 AC113410.3-201ENST00000623366 203 ntBASIC18.55■□□□□ 0.56
LRRC39Q96DD0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.55■□□□□ 0.56
LRRC39Q96DD0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.55■□□□□ 0.56
LRRC39Q96DD0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LRRC39Q96DD0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC39Q96DD0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC39Q96DD0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.55■□□□□ 0.56
LRRC39Q96DD0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.55■□□□□ 0.56
LRRC39Q96DD0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.55■□□□□ 0.56
LRRC39Q96DD0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC39Q96DD0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms