Protein–RNA interactions for Protein: Q969T3

SNX21, Sorting nexin-21, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21Q969T3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX21Q969T3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX21Q969T3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNX21Q969T3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX21Q969T3 MCCD1P1-208ENST00000445732 328 ntBASIC21.8■■□□□ 1.08
SNX21Q969T3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.8■■□□□ 1.08
SNX21Q969T3 AL031985.4-201ENST00000642138 673 ntBASIC21.8■■□□□ 1.08
SNX21Q969T3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX21Q969T3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC21.8■■□□□ 1.08
SNX21Q969T3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.8■■□□□ 1.08
SNX21Q969T3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX21Q969T3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.8■■□□□ 1.08
SNX21Q969T3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SNX21Q969T3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SNX21Q969T3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX21Q969T3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.79■■□□□ 1.08
SNX21Q969T3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
SNX21Q969T3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.79■■□□□ 1.08
SNX21Q969T3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC21.79■■□□□ 1.08
SNX21Q969T3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
SNX21Q969T3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SNX21Q969T3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX21Q969T3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SNX21Q969T3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.79■■□□□ 1.08
SNX21Q969T3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SNX21Q969T3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.79■■□□□ 1.08
SNX21Q969T3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX21Q969T3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SNX21Q969T3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX21Q969T3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX21Q969T3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX21Q969T3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SNX21Q969T3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX21Q969T3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
SNX21Q969T3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX21Q969T3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX21Q969T3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.78■■□□□ 1.08
SNX21Q969T3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SNX21Q969T3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SNX21Q969T3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
SNX21Q969T3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.78■■□□□ 1.08
SNX21Q969T3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SNX21Q969T3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC21.78■■□□□ 1.08
SNX21Q969T3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX21Q969T3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SNX21Q969T3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.78■■□□□ 1.08
SNX21Q969T3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.78■■□□□ 1.08
SNX21Q969T3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX21Q969T3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SNX21Q969T3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.78■■□□□ 1.08
SNX21Q969T3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX21Q969T3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SNX21Q969T3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX21Q969T3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.77■■□□□ 1.08
SNX21Q969T3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
SNX21Q969T3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.77■■□□□ 1.08
SNX21Q969T3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SNX21Q969T3 AC009102.3-201ENST00000623118 1491 ntBASIC21.77■■□□□ 1.08
SNX21Q969T3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SNX21Q969T3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SNX21Q969T3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX21Q969T3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.77■■□□□ 1.08
SNX21Q969T3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
SNX21Q969T3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX21Q969T3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX21Q969T3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
SNX21Q969T3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.77■■□□□ 1.08
SNX21Q969T3 MIR149-201ENST00000384879 89 ntBASIC21.77■■□□□ 1.08
SNX21Q969T3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.77■■□□□ 1.08
SNX21Q969T3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.77■■□□□ 1.08
SNX21Q969T3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.77■■□□□ 1.08
SNX21Q969T3 RN7SL471P-201ENST00000580476 299 ntBASIC21.77■■□□□ 1.08
SNX21Q969T3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.77■■□□□ 1.08
SNX21Q969T3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.77■■□□□ 1.08
SNX21Q969T3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX21Q969T3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX21Q969T3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SNX21Q969T3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX21Q969T3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX21Q969T3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SNX21Q969T3 AL023806.1-201ENST00000603994 1649 ntBASIC21.77■■□□□ 1.07
SNX21Q969T3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SNX21Q969T3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC21.76■■□□□ 1.07
SNX21Q969T3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX21Q969T3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC21.76■■□□□ 1.07
SNX21Q969T3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX21Q969T3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.76■■□□□ 1.07
SNX21Q969T3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX21Q969T3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SNX21Q969T3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNX21Q969T3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
SNX21Q969T3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX21Q969T3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX21Q969T3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNX21Q969T3 B3GAT3P1-201ENST00000471720 806 ntBASIC21.76■■□□□ 1.07
SNX21Q969T3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.76■■□□□ 1.07
SNX21Q969T3 AP000692.2-201ENST00000608391 879 ntBASIC21.76■■□□□ 1.07
SNX21Q969T3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNX21Q969T3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SNX21Q969T3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms