Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF34Q969K3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RNF34Q969K3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
RNF34Q969K3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF34Q969K3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RNF34Q969K3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF34Q969K3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF34Q969K3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF34Q969K3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF34Q969K3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RNF34Q969K3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF34Q969K3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF34Q969K3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF34Q969K3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF34Q969K3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF34Q969K3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF34Q969K3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF34Q969K3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF34Q969K3 HOMER2P1-201ENST00000455653 964 ntBASIC19.23■□□□□ 0.67
RNF34Q969K3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF34Q969K3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF34Q969K3 AC009065.1-201ENST00000564055 1225 ntBASIC19.23■□□□□ 0.67
RNF34Q969K3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.23■□□□□ 0.67
RNF34Q969K3 AL590326.2-201ENST00000625139 305 ntBASIC19.23■□□□□ 0.67
RNF34Q969K3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF34Q969K3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF34Q969K3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF34Q969K3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF34Q969K3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RNF34Q969K3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF34Q969K3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF34Q969K3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF34Q969K3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF34Q969K3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF34Q969K3 AC126763.1-201ENST00000552015 2118 ntBASIC19.22■□□□□ 0.67
RNF34Q969K3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF34Q969K3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF34Q969K3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF34Q969K3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF34Q969K3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF34Q969K3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF34Q969K3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
RNF34Q969K3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF34Q969K3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF34Q969K3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF34Q969K3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF34Q969K3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF34Q969K3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF34Q969K3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF34Q969K3 AC063952.2-201ENST00000498792 1227 ntBASIC19.22■□□□□ 0.67
RNF34Q969K3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF34Q969K3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF34Q969K3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF34Q969K3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF34Q969K3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF34Q969K3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF34Q969K3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF34Q969K3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF34Q969K3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RNF34Q969K3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RNF34Q969K3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF34Q969K3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF34Q969K3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF34Q969K3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF34Q969K3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF34Q969K3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF34Q969K3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF34Q969K3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF34Q969K3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF34Q969K3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF34Q969K3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF34Q969K3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF34Q969K3 WIZP1-201ENST00000531444 2299 ntBASIC19.21■□□□□ 0.67
RNF34Q969K3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RNF34Q969K3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.21■□□□□ 0.67
RNF34Q969K3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF34Q969K3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF34Q969K3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF34Q969K3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RNF34Q969K3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.21■□□□□ 0.67
RNF34Q969K3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF34Q969K3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF34Q969K3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.21■□□□□ 0.67
RNF34Q969K3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF34Q969K3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF34Q969K3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF34Q969K3 AC022616.7-201ENST00000525383 220 ntBASIC19.21■□□□□ 0.67
RNF34Q969K3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF34Q969K3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.21■□□□□ 0.67
RNF34Q969K3 AL157888.1-201ENST00000631930 593 ntBASIC19.21■□□□□ 0.67
RNF34Q969K3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF34Q969K3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF34Q969K3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF34Q969K3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF34Q969K3 AC005082.1-201ENST00000413042 2259 ntBASIC19.21■□□□□ 0.67
RNF34Q969K3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF34Q969K3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF34Q969K3 AL163051.1-201ENST00000569214 1512 ntBASIC19.2■□□□□ 0.66
RNF34Q969K3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF34Q969K3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms