Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 AC116562.2-201ENST00000507042 360 ntBASIC20.73■□□□□ 0.91
SMARCE1Q969G3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.73■□□□□ 0.91
SMARCE1Q969G3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.73■□□□□ 0.91
SMARCE1Q969G3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.73■□□□□ 0.91
SMARCE1Q969G3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.73■□□□□ 0.91
SMARCE1Q969G3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SMARCE1Q969G3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.73■□□□□ 0.91
SMARCE1Q969G3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SMARCE1Q969G3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SMARCE1Q969G3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.73■□□□□ 0.91
SMARCE1Q969G3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCE1Q969G3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.73■□□□□ 0.91
SMARCE1Q969G3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCE1Q969G3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCE1Q969G3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.72■□□□□ 0.91
SMARCE1Q969G3 AC067852.2-201ENST00000590513 2313 ntBASIC20.72■□□□□ 0.91
SMARCE1Q969G3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCE1Q969G3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCE1Q969G3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCE1Q969G3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SMARCE1Q969G3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCE1Q969G3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCE1Q969G3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCE1Q969G3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCE1Q969G3 AP000593.1-201ENST00000393668 712 ntBASIC20.72■□□□□ 0.91
SMARCE1Q969G3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCE1Q969G3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.72■□□□□ 0.91
SMARCE1Q969G3 NUDT16P1-203ENST00000513809 620 ntBASIC20.72■□□□□ 0.91
SMARCE1Q969G3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.72■□□□□ 0.91
SMARCE1Q969G3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.72■□□□□ 0.91
SMARCE1Q969G3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.72■□□□□ 0.91
SMARCE1Q969G3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SMARCE1Q969G3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.72■□□□□ 0.91
SMARCE1Q969G3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCE1Q969G3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCE1Q969G3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCE1Q969G3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SMARCE1Q969G3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCE1Q969G3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCE1Q969G3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCE1Q969G3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.72■□□□□ 0.91
SMARCE1Q969G3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SMARCE1Q969G3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SMARCE1Q969G3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.71■□□□□ 0.91
SMARCE1Q969G3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.71■□□□□ 0.91
SMARCE1Q969G3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SMARCE1Q969G3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.71■□□□□ 0.91
SMARCE1Q969G3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCE1Q969G3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCE1Q969G3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.71■□□□□ 0.91
SMARCE1Q969G3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCE1Q969G3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCE1Q969G3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SMARCE1Q969G3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.71■□□□□ 0.91
SMARCE1Q969G3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.71■□□□□ 0.91
SMARCE1Q969G3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SMARCE1Q969G3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.71■□□□□ 0.91
SMARCE1Q969G3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.71■□□□□ 0.91
SMARCE1Q969G3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCE1Q969G3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCE1Q969G3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCE1Q969G3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCE1Q969G3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCE1Q969G3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCE1Q969G3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCE1Q969G3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCE1Q969G3 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.71■□□□□ 0.91
SMARCE1Q969G3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCE1Q969G3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCE1Q969G3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
SMARCE1Q969G3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.7■□□□□ 0.91
SMARCE1Q969G3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.7■□□□□ 0.91
SMARCE1Q969G3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SMARCE1Q969G3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
SMARCE1Q969G3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCE1Q969G3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.7■□□□□ 0.9
SMARCE1Q969G3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SMARCE1Q969G3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.7■□□□□ 0.9
SMARCE1Q969G3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCE1Q969G3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCE1Q969G3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCE1Q969G3 PRORSD1P-201ENST00000295112 541 ntBASIC20.7■□□□□ 0.9
SMARCE1Q969G3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCE1Q969G3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCE1Q969G3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.7■□□□□ 0.9
SMARCE1Q969G3 AC097488.1-201ENST00000507834 756 ntBASIC20.7■□□□□ 0.9
SMARCE1Q969G3 AC142381.4-202ENST00000563973 229 ntBASIC20.7■□□□□ 0.9
SMARCE1Q969G3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.7■□□□□ 0.9
SMARCE1Q969G3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCE1Q969G3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCE1Q969G3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCE1Q969G3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCE1Q969G3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.7■□□□□ 0.9
SMARCE1Q969G3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.7■□□□□ 0.9
SMARCE1Q969G3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCE1Q969G3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.7■□□□□ 0.9
SMARCE1Q969G3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SMARCE1Q969G3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SMARCE1Q969G3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCE1Q969G3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms