Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
AP3S1Q92572 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S1Q92572 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S1Q92572 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP3S1Q92572 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.21■□□□□ 0.19
AP3S1Q92572 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.18
AP3S1Q92572 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
AP3S1Q92572 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
AP3S1Q92572 AC022211.2-201ENST00000585075 2527 ntBASIC16.2■□□□□ 0.18
AP3S1Q92572 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
AP3S1Q92572 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S1Q92572 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S1Q92572 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S1Q92572 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S1Q92572 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
AP3S1Q92572 KRT17P1-201ENST00000399211 1546 ntBASIC16.2■□□□□ 0.18
AP3S1Q92572 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.2■□□□□ 0.18
AP3S1Q92572 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
AP3S1Q92572 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S1Q92572 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
AP3S1Q92572 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S1Q92572 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.2■□□□□ 0.18
AP3S1Q92572 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S1Q92572 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.2■□□□□ 0.18
AP3S1Q92572 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S1Q92572 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S1Q92572 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S1Q92572 CYP2T1P-201ENST00000432607 1285 ntBASIC16.2■□□□□ 0.18
AP3S1Q92572 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.2■□□□□ 0.18
AP3S1Q92572 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.2■□□□□ 0.18
AP3S1Q92572 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.2■□□□□ 0.18
AP3S1Q92572 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.2■□□□□ 0.18
AP3S1Q92572 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
AP3S1Q92572 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S1Q92572 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S1Q92572 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.2■□□□□ 0.18
AP3S1Q92572 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S1Q92572 AC006116.8-202ENST00000587620 1550 ntBASIC16.2■□□□□ 0.18
AP3S1Q92572 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.2■□□□□ 0.18
AP3S1Q92572 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
AP3S1Q92572 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S1Q92572 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S1Q92572 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S1Q92572 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S1Q92572 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S1Q92572 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S1Q92572 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.2■□□□□ 0.18
AP3S1Q92572 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S1Q92572 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S1Q92572 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S1Q92572 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP3S1Q92572 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S1Q92572 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S1Q92572 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S1Q92572 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.19■□□□□ 0.18
AP3S1Q92572 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S1Q92572 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.19■□□□□ 0.18
AP3S1Q92572 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S1Q92572 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.19■□□□□ 0.18
AP3S1Q92572 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.19■□□□□ 0.18
AP3S1Q92572 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
AP3S1Q92572 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S1Q92572 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S1Q92572 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
AP3S1Q92572 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S1Q92572 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.19■□□□□ 0.18
AP3S1Q92572 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S1Q92572 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
AP3S1Q92572 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S1Q92572 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.19■□□□□ 0.18
AP3S1Q92572 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S1Q92572 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S1Q92572 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
AP3S1Q92572 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S1Q92572 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
AP3S1Q92572 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S1Q92572 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.19■□□□□ 0.18
AP3S1Q92572 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S1Q92572 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
AP3S1Q92572 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.19■□□□□ 0.18
AP3S1Q92572 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S1Q92572 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
AP3S1Q92572 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S1Q92572 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
AP3S1Q92572 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S1Q92572 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S1Q92572 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S1Q92572 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP3S1Q92572 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S1Q92572 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S1Q92572 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
AP3S1Q92572 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S1Q92572 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S1Q92572 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S1Q92572 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S1Q92572 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S1Q92572 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.18■□□□□ 0.18
AP3S1Q92572 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.18■□□□□ 0.18
AP3S1Q92572 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AP3S1Q92572 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms