Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TRAF3IP1Q8TDR0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TRAF3IP1Q8TDR0 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
TRAF3IP1Q8TDR0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF3IP1Q8TDR0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF3IP1Q8TDR0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TRAF3IP1Q8TDR0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF3IP1Q8TDR0 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF3IP1Q8TDR0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
TRAF3IP1Q8TDR0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF3IP1Q8TDR0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF3IP1Q8TDR0 AC018470.1-201ENST00000624790 3129 ntBASIC19.18■□□□□ 0.66
TRAF3IP1Q8TDR0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
TRAF3IP1Q8TDR0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.18■□□□□ 0.66
TRAF3IP1Q8TDR0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.18■□□□□ 0.66
TRAF3IP1Q8TDR0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.18■□□□□ 0.66
TRAF3IP1Q8TDR0 AL355075.4-201ENST00000554988 638 ntBASIC19.18■□□□□ 0.66
TRAF3IP1Q8TDR0 AL353719.1-201ENST00000566847 864 ntBASIC19.18■□□□□ 0.66
TRAF3IP1Q8TDR0 AC116562.4-202ENST00000641738 218 ntBASIC19.18■□□□□ 0.66
TRAF3IP1Q8TDR0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF3IP1Q8TDR0 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TRAF3IP1Q8TDR0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF3IP1Q8TDR0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF3IP1Q8TDR0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF3IP1Q8TDR0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.18■□□□□ 0.66
TRAF3IP1Q8TDR0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF3IP1Q8TDR0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAF3IP1Q8TDR0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRAF3IP1Q8TDR0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TRAF3IP1Q8TDR0 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TRAF3IP1Q8TDR0 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TRAF3IP1Q8TDR0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAF3IP1Q8TDR0 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAF3IP1Q8TDR0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAF3IP1Q8TDR0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAF3IP1Q8TDR0 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
TRAF3IP1Q8TDR0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAF3IP1Q8TDR0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
TRAF3IP1Q8TDR0 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAF3IP1Q8TDR0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRAF3IP1Q8TDR0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.17■□□□□ 0.66
TRAF3IP1Q8TDR0 BX088651.1-201ENST00000540551 451 ntBASIC19.17■□□□□ 0.66
TRAF3IP1Q8TDR0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.17■□□□□ 0.66
TRAF3IP1Q8TDR0 MIR4497-201ENST00000583208 89 ntBASIC19.17■□□□□ 0.66
TRAF3IP1Q8TDR0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.17■□□□□ 0.66
TRAF3IP1Q8TDR0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRAF3IP1Q8TDR0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.17■□□□□ 0.66
TRAF3IP1Q8TDR0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.17■□□□□ 0.66
TRAF3IP1Q8TDR0 AL023803.3-201ENST00000615559 522 ntBASIC19.17■□□□□ 0.66
TRAF3IP1Q8TDR0 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAF3IP1Q8TDR0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAF3IP1Q8TDR0 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRAF3IP1Q8TDR0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TRAF3IP1Q8TDR0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRAF3IP1Q8TDR0 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
TRAF3IP1Q8TDR0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAF3IP1Q8TDR0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAF3IP1Q8TDR0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAF3IP1Q8TDR0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAF3IP1Q8TDR0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRAF3IP1Q8TDR0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TRAF3IP1Q8TDR0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.16■□□□□ 0.66
TRAF3IP1Q8TDR0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TRAF3IP1Q8TDR0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.16■□□□□ 0.66
TRAF3IP1Q8TDR0 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAF3IP1Q8TDR0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.16■□□□□ 0.66
TRAF3IP1Q8TDR0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.16■□□□□ 0.66
TRAF3IP1Q8TDR0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TRAF3IP1Q8TDR0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
TRAF3IP1Q8TDR0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAF3IP1Q8TDR0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.15■□□□□ 0.66
TRAF3IP1Q8TDR0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAF3IP1Q8TDR0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.15■□□□□ 0.66
TRAF3IP1Q8TDR0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAF3IP1Q8TDR0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAF3IP1Q8TDR0 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAF3IP1Q8TDR0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.15■□□□□ 0.66
TRAF3IP1Q8TDR0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAF3IP1Q8TDR0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TRAF3IP1Q8TDR0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.15■□□□□ 0.66
TRAF3IP1Q8TDR0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.15■□□□□ 0.66
TRAF3IP1Q8TDR0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.15■□□□□ 0.66
TRAF3IP1Q8TDR0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAF3IP1Q8TDR0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAF3IP1Q8TDR0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAF3IP1Q8TDR0 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAF3IP1Q8TDR0 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRAF3IP1Q8TDR0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.15■□□□□ 0.66
TRAF3IP1Q8TDR0 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
TRAF3IP1Q8TDR0 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAF3IP1Q8TDR0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAF3IP1Q8TDR0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.15■□□□□ 0.66
TRAF3IP1Q8TDR0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAF3IP1Q8TDR0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.15■□□□□ 0.66
TRAF3IP1Q8TDR0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
TRAF3IP1Q8TDR0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAF3IP1Q8TDR0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.15■□□□□ 0.66
TRAF3IP1Q8TDR0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAF3IP1Q8TDR0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
TRAF3IP1Q8TDR0 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms