Protein–RNA interactions for Protein: Q8NEG5

ZSWIM2, E3 ubiquitin-protein ligase ZSWIM2, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM2Q8NEG5 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZSWIM2Q8NEG5 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZSWIM2Q8NEG5 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20■□□□□ 0.79
ZSWIM2Q8NEG5 HBZP1-201ENST00000354915 429 ntBASIC20■□□□□ 0.79
ZSWIM2Q8NEG5 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZSWIM2Q8NEG5 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20■□□□□ 0.79
ZSWIM2Q8NEG5 SAPCD2P2-201ENST00000431719 1174 ntBASIC20■□□□□ 0.79
ZSWIM2Q8NEG5 HOMER2P1-201ENST00000455653 964 ntBASIC20■□□□□ 0.79
ZSWIM2Q8NEG5 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZSWIM2Q8NEG5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20■□□□□ 0.79
ZSWIM2Q8NEG5 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20■□□□□ 0.79
ZSWIM2Q8NEG5 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20■□□□□ 0.79
ZSWIM2Q8NEG5 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20■□□□□ 0.79
ZSWIM2Q8NEG5 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20■□□□□ 0.79
ZSWIM2Q8NEG5 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20■□□□□ 0.79
ZSWIM2Q8NEG5 MIR3180-4-201ENST00000582223 153 ntBASIC20■□□□□ 0.79
ZSWIM2Q8NEG5 AL445228.2-201ENST00000605589 952 ntBASIC20■□□□□ 0.79
ZSWIM2Q8NEG5 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20■□□□□ 0.79
ZSWIM2Q8NEG5 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20■□□□□ 0.79
ZSWIM2Q8NEG5 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ZSWIM2Q8NEG5 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
ZSWIM2Q8NEG5 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZSWIM2Q8NEG5 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZSWIM2Q8NEG5 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZSWIM2Q8NEG5 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20■□□□□ 0.79
ZSWIM2Q8NEG5 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20■□□□□ 0.79
ZSWIM2Q8NEG5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZSWIM2Q8NEG5 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZSWIM2Q8NEG5 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20■□□□□ 0.79
ZSWIM2Q8NEG5 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
ZSWIM2Q8NEG5 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
ZSWIM2Q8NEG5 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
ZSWIM2Q8NEG5 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZSWIM2Q8NEG5 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.99■□□□□ 0.79
ZSWIM2Q8NEG5 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
ZSWIM2Q8NEG5 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZSWIM2Q8NEG5 AL031133.1-201ENST00000406807 723 ntBASIC19.99■□□□□ 0.79
ZSWIM2Q8NEG5 HLA-F-220ENST00000434407 884 ntBASIC19.99■□□□□ 0.79
ZSWIM2Q8NEG5 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.99■□□□□ 0.79
ZSWIM2Q8NEG5 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.99■□□□□ 0.79
ZSWIM2Q8NEG5 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.99■□□□□ 0.79
ZSWIM2Q8NEG5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZSWIM2Q8NEG5 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZSWIM2Q8NEG5 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZSWIM2Q8NEG5 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.99■□□□□ 0.79
ZSWIM2Q8NEG5 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZSWIM2Q8NEG5 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZSWIM2Q8NEG5 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
ZSWIM2Q8NEG5 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
ZSWIM2Q8NEG5 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZSWIM2Q8NEG5 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ZSWIM2Q8NEG5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
ZSWIM2Q8NEG5 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 AC034232.1-201ENST00000506026 1064 ntBASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 AL136038.4-201ENST00000603606 1261 ntBASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 AC007613.1-201ENST00000572811 2597 ntBASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZSWIM2Q8NEG5 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ZSWIM2Q8NEG5 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
ZSWIM2Q8NEG5 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZSWIM2Q8NEG5 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
ZSWIM2Q8NEG5 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.97■□□□□ 0.79
ZSWIM2Q8NEG5 LINC01311-201ENST00000565162 1445 ntBASIC19.97■□□□□ 0.79
ZSWIM2Q8NEG5 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
ZSWIM2Q8NEG5 PVRIG2P-201ENST00000435460 978 ntBASIC19.97■□□□□ 0.79
ZSWIM2Q8NEG5 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZSWIM2Q8NEG5 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.97■□□□□ 0.79
ZSWIM2Q8NEG5 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
ZSWIM2Q8NEG5 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
ZSWIM2Q8NEG5 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZSWIM2Q8NEG5 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZSWIM2Q8NEG5 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZSWIM2Q8NEG5 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms