Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TTC16Q8NEE8 AL162741.1-201ENST00000565563 1558 ntBASIC19.31■□□□□ 0.68
TTC16Q8NEE8 AC116562.4-201ENST00000641316 2276 ntBASIC19.31■□□□□ 0.68
TTC16Q8NEE8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.31■□□□□ 0.68
TTC16Q8NEE8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TTC16Q8NEE8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TTC16Q8NEE8 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
TTC16Q8NEE8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TTC16Q8NEE8 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.3■□□□□ 0.68
TTC16Q8NEE8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.3■□□□□ 0.68
TTC16Q8NEE8 CROCCP1-201ENST00000426910 5675 ntBASIC19.3■□□□□ 0.68
TTC16Q8NEE8 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
TTC16Q8NEE8 KRT8P32-201ENST00000512863 1461 ntBASIC19.3■□□□□ 0.68
TTC16Q8NEE8 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TTC16Q8NEE8 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TTC16Q8NEE8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TTC16Q8NEE8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.3■□□□□ 0.68
TTC16Q8NEE8 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TTC16Q8NEE8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TTC16Q8NEE8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TTC16Q8NEE8 MIR564-202ENST00000385049 94 ntBASIC19.3■□□□□ 0.68
TTC16Q8NEE8 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TTC16Q8NEE8 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TTC16Q8NEE8 AC092329.2-201ENST00000598402 547 ntBASIC19.3■□□□□ 0.68
TTC16Q8NEE8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TTC16Q8NEE8 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.3■□□□□ 0.68
TTC16Q8NEE8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.3■□□□□ 0.68
TTC16Q8NEE8 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TTC16Q8NEE8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.3■□□□□ 0.68
TTC16Q8NEE8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TTC16Q8NEE8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TTC16Q8NEE8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.3■□□□□ 0.68
TTC16Q8NEE8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TTC16Q8NEE8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TTC16Q8NEE8 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TTC16Q8NEE8 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.29■□□□□ 0.68
TTC16Q8NEE8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TTC16Q8NEE8 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TTC16Q8NEE8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TTC16Q8NEE8 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TTC16Q8NEE8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TTC16Q8NEE8 TSSC2-201ENST00000450217 709 ntBASIC19.29■□□□□ 0.68
TTC16Q8NEE8 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.29■□□□□ 0.68
TTC16Q8NEE8 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TTC16Q8NEE8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.29■□□□□ 0.68
TTC16Q8NEE8 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.29■□□□□ 0.68
TTC16Q8NEE8 PRELID1P1-202ENST00000567272 903 ntBASIC19.29■□□□□ 0.68
TTC16Q8NEE8 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.29■□□□□ 0.68
TTC16Q8NEE8 AL121672.3-201ENST00000608644 468 ntBASIC19.29■□□□□ 0.68
TTC16Q8NEE8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TTC16Q8NEE8 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.29■□□□□ 0.68
TTC16Q8NEE8 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TTC16Q8NEE8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
TTC16Q8NEE8 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TTC16Q8NEE8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TTC16Q8NEE8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TTC16Q8NEE8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TTC16Q8NEE8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TTC16Q8NEE8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.29■□□□□ 0.68
TTC16Q8NEE8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.29■□□□□ 0.68
TTC16Q8NEE8 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TTC16Q8NEE8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TTC16Q8NEE8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TTC16Q8NEE8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.29■□□□□ 0.68
TTC16Q8NEE8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TTC16Q8NEE8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TTC16Q8NEE8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TTC16Q8NEE8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.28■□□□□ 0.68
TTC16Q8NEE8 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TTC16Q8NEE8 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TTC16Q8NEE8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TTC16Q8NEE8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TTC16Q8NEE8 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TTC16Q8NEE8 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TTC16Q8NEE8 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.28■□□□□ 0.68
TTC16Q8NEE8 AL450487.1-201ENST00000426799 995 ntBASIC19.28■□□□□ 0.68
TTC16Q8NEE8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TTC16Q8NEE8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
TTC16Q8NEE8 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.28■□□□□ 0.68
TTC16Q8NEE8 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TTC16Q8NEE8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TTC16Q8NEE8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TTC16Q8NEE8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TTC16Q8NEE8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.28■□□□□ 0.68
TTC16Q8NEE8 AC034236.2-201ENST00000606662 1610 ntBASIC19.28■□□□□ 0.68
TTC16Q8NEE8 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.28■□□□□ 0.68
TTC16Q8NEE8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TTC16Q8NEE8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.28■□□□□ 0.68
TTC16Q8NEE8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TTC16Q8NEE8 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TTC16Q8NEE8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TTC16Q8NEE8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TTC16Q8NEE8 AL161938.1-201ENST00000569833 2180 ntBASIC19.27■□□□□ 0.68
TTC16Q8NEE8 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TTC16Q8NEE8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TTC16Q8NEE8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TTC16Q8NEE8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.27■□□□□ 0.68
TTC16Q8NEE8 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TTC16Q8NEE8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TTC16Q8NEE8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms