Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC63Q8NA47 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.68■□□□□ 0.58
CCDC63Q8NA47 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC63Q8NA47 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC63Q8NA47 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC63Q8NA47 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC63Q8NA47 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC63Q8NA47 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC63Q8NA47 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC63Q8NA47 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC63Q8NA47 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC63Q8NA47 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC63Q8NA47 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC63Q8NA47 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC63Q8NA47 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC63Q8NA47 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC63Q8NA47 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CCDC63Q8NA47 HEIH-201ENST00000623091 1652 ntBASIC18.66■□□□□ 0.58
CCDC63Q8NA47 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC63Q8NA47 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC63Q8NA47 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCDC63Q8NA47 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.66■□□□□ 0.58
CCDC63Q8NA47 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC63Q8NA47 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC63Q8NA47 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CCDC63Q8NA47 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC63Q8NA47 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CCDC63Q8NA47 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC63Q8NA47 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC63Q8NA47 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC63Q8NA47 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC63Q8NA47 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC63Q8NA47 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC63Q8NA47 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CCDC63Q8NA47 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCDC63Q8NA47 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC63Q8NA47 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC63Q8NA47 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC63Q8NA47 HLA-A-209ENST00000638375 975 ntBASIC18.66■□□□□ 0.58
CCDC63Q8NA47 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
CCDC63Q8NA47 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC63Q8NA47 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC63Q8NA47 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC63Q8NA47 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCDC63Q8NA47 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC63Q8NA47 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC63Q8NA47 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC63Q8NA47 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC63Q8NA47 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC63Q8NA47 AC135776.1-201ENST00000319817 2481 ntBASIC18.65■□□□□ 0.58
CCDC63Q8NA47 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC63Q8NA47 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCDC63Q8NA47 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC63Q8NA47 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC63Q8NA47 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC63Q8NA47 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC63Q8NA47 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC63Q8NA47 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC63Q8NA47 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC63Q8NA47 AC083880.1-201ENST00000608266 535 ntBASIC18.65■□□□□ 0.58
CCDC63Q8NA47 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC63Q8NA47 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC63Q8NA47 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC63Q8NA47 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC63Q8NA47 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC63Q8NA47 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC63Q8NA47 AL499627.1-201ENST00000569373 2188 ntBASIC18.65■□□□□ 0.58
CCDC63Q8NA47 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC63Q8NA47 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC63Q8NA47 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms