Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.29■□□□□ 0.04
COMMD1Q8N668 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD1Q8N668 TSPY7P-201ENST00000431358 1114 ntBASIC15.29■□□□□ 0.04
COMMD1Q8N668 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD1Q8N668 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.29■□□□□ 0.04
COMMD1Q8N668 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.29■□□□□ 0.04
COMMD1Q8N668 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.29■□□□□ 0.04
COMMD1Q8N668 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.29■□□□□ 0.04
COMMD1Q8N668 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.29■□□□□ 0.04
COMMD1Q8N668 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.29■□□□□ 0.04
COMMD1Q8N668 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC15.29■□□□□ 0.04
COMMD1Q8N668 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.29■□□□□ 0.04
COMMD1Q8N668 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.29■□□□□ 0.04
COMMD1Q8N668 AL445675.2-201ENST00000620291 557 ntBASIC15.29■□□□□ 0.04
COMMD1Q8N668 FER1L4-210ENST00000615531 5998 ntBASIC15.29■□□□□ 0.04
COMMD1Q8N668 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COMMD1Q8N668 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
COMMD1Q8N668 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.29■□□□□ 0.04
COMMD1Q8N668 AC012317.2-201ENST00000623305 2251 ntBASIC15.29■□□□□ 0.04
COMMD1Q8N668 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.29■□□□□ 0.04
COMMD1Q8N668 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COMMD1Q8N668 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COMMD1Q8N668 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.28■□□□□ 0.04
COMMD1Q8N668 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.28■□□□□ 0.04
COMMD1Q8N668 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
COMMD1Q8N668 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
COMMD1Q8N668 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COMMD1Q8N668 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
COMMD1Q8N668 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
COMMD1Q8N668 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COMMD1Q8N668 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
COMMD1Q8N668 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COMMD1Q8N668 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COMMD1Q8N668 AC026271.3-201ENST00000571884 352 ntBASIC15.28■□□□□ 0.04
COMMD1Q8N668 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
COMMD1Q8N668 AC073912.3-201ENST00000624414 853 ntBASIC15.28■□□□□ 0.04
COMMD1Q8N668 AL031985.4-201ENST00000642138 673 ntBASIC15.28■□□□□ 0.04
COMMD1Q8N668 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COMMD1Q8N668 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
COMMD1Q8N668 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.28■□□□□ 0.04
COMMD1Q8N668 IRX1P1-201ENST00000438849 1838 ntBASIC15.28■□□□□ 0.04
COMMD1Q8N668 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
COMMD1Q8N668 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.28■□□□□ 0.04
COMMD1Q8N668 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
COMMD1Q8N668 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.28■□□□□ 0.04
COMMD1Q8N668 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.28■□□□□ 0.04
COMMD1Q8N668 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
COMMD1Q8N668 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COMMD1Q8N668 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
COMMD1Q8N668 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
COMMD1Q8N668 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COMMD1Q8N668 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COMMD1Q8N668 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
COMMD1Q8N668 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
COMMD1Q8N668 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
COMMD1Q8N668 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
COMMD1Q8N668 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
COMMD1Q8N668 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
COMMD1Q8N668 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
COMMD1Q8N668 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
COMMD1Q8N668 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
COMMD1Q8N668 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.27■□□□□ 0.04
COMMD1Q8N668 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
COMMD1Q8N668 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
COMMD1Q8N668 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
COMMD1Q8N668 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
COMMD1Q8N668 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
COMMD1Q8N668 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
COMMD1Q8N668 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.27■□□□□ 0.04
COMMD1Q8N668 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.27■□□□□ 0.04
COMMD1Q8N668 FAM197Y1-201ENST00000421178 764 ntBASIC15.27■□□□□ 0.04
COMMD1Q8N668 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.27■□□□□ 0.04
COMMD1Q8N668 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
COMMD1Q8N668 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.27■□□□□ 0.04
COMMD1Q8N668 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
COMMD1Q8N668 NUDT16P1-203ENST00000513809 620 ntBASIC15.27■□□□□ 0.04
COMMD1Q8N668 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.27■□□□□ 0.04
COMMD1Q8N668 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.27■□□□□ 0.04
COMMD1Q8N668 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.27■□□□□ 0.04
COMMD1Q8N668 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
COMMD1Q8N668 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.27■□□□□ 0.04
COMMD1Q8N668 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.27■□□□□ 0.04
COMMD1Q8N668 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.27■□□□□ 0.04
COMMD1Q8N668 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
COMMD1Q8N668 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
COMMD1Q8N668 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.27■□□□□ 0.03
COMMD1Q8N668 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
COMMD1Q8N668 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.27■□□□□ 0.03
COMMD1Q8N668 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
COMMD1Q8N668 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
COMMD1Q8N668 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
COMMD1Q8N668 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
COMMD1Q8N668 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
COMMD1Q8N668 AC084018.2-201ENST00000613093 2607 ntBASIC15.27■□□□□ 0.03
COMMD1Q8N668 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.27■□□□□ 0.03
COMMD1Q8N668 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
COMMD1Q8N668 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.26■□□□□ 0.03
COMMD1Q8N668 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
COMMD1Q8N668 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.26■□□□□ 0.03
COMMD1Q8N668 ANO7L1-203ENST00000602586 1720 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms