Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.51■□□□□ 0.71
TTC39CQ8N584 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TTC39CQ8N584 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TTC39CQ8N584 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TTC39CQ8N584 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TTC39CQ8N584 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TTC39CQ8N584 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TTC39CQ8N584 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TTC39CQ8N584 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TTC39CQ8N584 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TTC39CQ8N584 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.51■□□□□ 0.71
TTC39CQ8N584 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.51■□□□□ 0.71
TTC39CQ8N584 AC113404.2-201ENST00000507884 177 ntBASIC19.51■□□□□ 0.71
TTC39CQ8N584 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.51■□□□□ 0.71
TTC39CQ8N584 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.51■□□□□ 0.71
TTC39CQ8N584 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.51■□□□□ 0.71
TTC39CQ8N584 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.51■□□□□ 0.71
TTC39CQ8N584 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.51■□□□□ 0.71
TTC39CQ8N584 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TTC39CQ8N584 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TTC39CQ8N584 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TTC39CQ8N584 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.51■□□□□ 0.71
TTC39CQ8N584 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TTC39CQ8N584 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TTC39CQ8N584 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.51■□□□□ 0.71
TTC39CQ8N584 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TTC39CQ8N584 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TTC39CQ8N584 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TTC39CQ8N584 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.51■□□□□ 0.71
TTC39CQ8N584 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TTC39CQ8N584 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TTC39CQ8N584 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
TTC39CQ8N584 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TTC39CQ8N584 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TTC39CQ8N584 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TTC39CQ8N584 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.5■□□□□ 0.71
TTC39CQ8N584 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TTC39CQ8N584 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TTC39CQ8N584 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TTC39CQ8N584 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
TTC39CQ8N584 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.5■□□□□ 0.71
TTC39CQ8N584 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.5■□□□□ 0.71
TTC39CQ8N584 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.5■□□□□ 0.71
TTC39CQ8N584 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.5■□□□□ 0.71
TTC39CQ8N584 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.5■□□□□ 0.71
TTC39CQ8N584 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TTC39CQ8N584 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.5■□□□□ 0.71
TTC39CQ8N584 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TTC39CQ8N584 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TTC39CQ8N584 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TTC39CQ8N584 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TTC39CQ8N584 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.5■□□□□ 0.71
TTC39CQ8N584 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TTC39CQ8N584 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TTC39CQ8N584 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39CQ8N584 ESPNP-201ENST00000270691 2015 ntBASIC19.49■□□□□ 0.71
TTC39CQ8N584 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.49■□□□□ 0.71
TTC39CQ8N584 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39CQ8N584 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39CQ8N584 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39CQ8N584 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39CQ8N584 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39CQ8N584 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.49■□□□□ 0.71
TTC39CQ8N584 MIR662-201ENST00000384847 95 ntBASIC19.49■□□□□ 0.71
TTC39CQ8N584 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39CQ8N584 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39CQ8N584 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39CQ8N584 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39CQ8N584 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39CQ8N584 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TTC39CQ8N584 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.49■□□□□ 0.71
TTC39CQ8N584 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.49■□□□□ 0.71
TTC39CQ8N584 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.49■□□□□ 0.71
TTC39CQ8N584 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39CQ8N584 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39CQ8N584 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39CQ8N584 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39CQ8N584 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
TTC39CQ8N584 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TTC39CQ8N584 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.49■□□□□ 0.71
TTC39CQ8N584 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.48■□□□□ 0.71
TTC39CQ8N584 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TTC39CQ8N584 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
TTC39CQ8N584 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.48■□□□□ 0.71
TTC39CQ8N584 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TTC39CQ8N584 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TTC39CQ8N584 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TTC39CQ8N584 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.48■□□□□ 0.71
TTC39CQ8N584 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.48■□□□□ 0.71
TTC39CQ8N584 KRT18P48-201ENST00000434763 852 ntBASIC19.48■□□□□ 0.71
TTC39CQ8N584 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.48■□□□□ 0.71
TTC39CQ8N584 AC092597.1-201ENST00000487352 616 ntBASIC19.48■□□□□ 0.71
TTC39CQ8N584 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.48■□□□□ 0.71
TTC39CQ8N584 ZNF444P1-201ENST00000559497 298 ntBASIC19.48■□□□□ 0.71
TTC39CQ8N584 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.48■□□□□ 0.71
TTC39CQ8N584 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TTC39CQ8N584 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.48■□□□□ 0.71
TTC39CQ8N584 AL121956.5-201ENST00000625261 221 ntBASIC19.48■□□□□ 0.71
TTC39CQ8N584 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.48■□□□□ 0.71
TTC39CQ8N584 AL020996.1-203ENST00000536896 2307 ntBASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms