Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
ABCA6Q8N139 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
ABCA6Q8N139 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
ABCA6Q8N139 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
ABCA6Q8N139 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC27.11■■□□□ 1.93
ABCA6Q8N139 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
ABCA6Q8N139 SDCCAG3P1-201ENST00000589292 1150 ntBASIC27.11■■□□□ 1.93
ABCA6Q8N139 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC27.11■■□□□ 1.93
ABCA6Q8N139 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC27.11■■□□□ 1.93
ABCA6Q8N139 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
ABCA6Q8N139 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
ABCA6Q8N139 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC27.11■■□□□ 1.93
ABCA6Q8N139 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
ABCA6Q8N139 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
ABCA6Q8N139 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC27.1■■□□□ 1.93
ABCA6Q8N139 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
ABCA6Q8N139 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
ABCA6Q8N139 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
ABCA6Q8N139 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
ABCA6Q8N139 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
ABCA6Q8N139 CFL1-212ENST00000531413 636 ntTSL 3 BASIC27.1■■□□□ 1.93
ABCA6Q8N139 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC27.1■■□□□ 1.93
ABCA6Q8N139 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
ABCA6Q8N139 SDHAP2-201ENST00000455183 2001 ntBASIC27.1■■□□□ 1.93
ABCA6Q8N139 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
ABCA6Q8N139 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC27.1■■□□□ 1.93
ABCA6Q8N139 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
ABCA6Q8N139 AC079776.2-201ENST00000641154 1609 ntBASIC27.09■■□□□ 1.93
ABCA6Q8N139 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC27.09■■□□□ 1.93
ABCA6Q8N139 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
ABCA6Q8N139 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC27.09■■□□□ 1.93
ABCA6Q8N139 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
ABCA6Q8N139 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
ABCA6Q8N139 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
ABCA6Q8N139 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
ABCA6Q8N139 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
ABCA6Q8N139 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC27.09■■□□□ 1.93
ABCA6Q8N139 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC27.09■■□□□ 1.93
ABCA6Q8N139 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC27.09■■□□□ 1.93
ABCA6Q8N139 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
ABCA6Q8N139 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
ABCA6Q8N139 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
ABCA6Q8N139 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC27.09■■□□□ 1.93
ABCA6Q8N139 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
ABCA6Q8N139 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
ABCA6Q8N139 AC108751.1-201ENST00000490852 363 ntBASIC27.08■■□□□ 1.93
ABCA6Q8N139 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
ABCA6Q8N139 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC27.08■■□□□ 1.93
ABCA6Q8N139 AC083906.6-201ENST00000641366 219 ntBASIC27.08■■□□□ 1.93
ABCA6Q8N139 AC079781.4-201ENST00000641908 219 ntBASIC27.08■■□□□ 1.93
ABCA6Q8N139 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC27.08■■□□□ 1.93
ABCA6Q8N139 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
ABCA6Q8N139 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
ABCA6Q8N139 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
ABCA6Q8N139 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
ABCA6Q8N139 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
ABCA6Q8N139 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
ABCA6Q8N139 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
ABCA6Q8N139 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
ABCA6Q8N139 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
ABCA6Q8N139 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC27.08■■□□□ 1.93
ABCA6Q8N139 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
ABCA6Q8N139 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC27.08■■□□□ 1.92
ABCA6Q8N139 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
ABCA6Q8N139 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC27.07■■□□□ 1.92
ABCA6Q8N139 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC27.07■■□□□ 1.92
ABCA6Q8N139 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
ABCA6Q8N139 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
ABCA6Q8N139 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
ABCA6Q8N139 MIR3197-201ENST00000582241 73 ntBASIC27.07■■□□□ 1.92
ABCA6Q8N139 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC27.07■■□□□ 1.92
ABCA6Q8N139 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC27.07■■□□□ 1.92
ABCA6Q8N139 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
ABCA6Q8N139 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
ABCA6Q8N139 AC002310.6-201ENST00000624451 1377 ntBASIC27.07■■□□□ 1.92
ABCA6Q8N139 EFS-203ENST00000429593 2610 ntTSL 2 BASIC27.06■■□□□ 1.92
ABCA6Q8N139 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
ABCA6Q8N139 MCCD1P2-201ENST00000423228 335 ntBASIC27.06■■□□□ 1.92
ABCA6Q8N139 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC27.06■■□□□ 1.92
ABCA6Q8N139 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC27.06■■□□□ 1.92
ABCA6Q8N139 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
ABCA6Q8N139 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
ABCA6Q8N139 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
ABCA6Q8N139 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
ABCA6Q8N139 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
ABCA6Q8N139 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC27.06■■□□□ 1.92
ABCA6Q8N139 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
ABCA6Q8N139 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC27.06■■□□□ 1.92
ABCA6Q8N139 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
ABCA6Q8N139 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
ABCA6Q8N139 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
ABCA6Q8N139 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC27.05■■□□□ 1.92
ABCA6Q8N139 AC027612.4-201ENST00000605371 583 ntBASIC27.05■■□□□ 1.92
ABCA6Q8N139 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC27.05■■□□□ 1.92
ABCA6Q8N139 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC27.05■■□□□ 1.92
ABCA6Q8N139 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC27.05■■□□□ 1.92
ABCA6Q8N139 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC27.05■■□□□ 1.92
ABCA6Q8N139 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
ABCA6Q8N139 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
ABCA6Q8N139 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms