Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
XRN1Q8IZH2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
XRN1Q8IZH2 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC25.41■■□□□ 1.66
XRN1Q8IZH2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
XRN1Q8IZH2 AC079776.2-201ENST00000641154 1609 ntBASIC25.41■■□□□ 1.66
XRN1Q8IZH2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
XRN1Q8IZH2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
XRN1Q8IZH2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC25.4■■□□□ 1.66
XRN1Q8IZH2 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
XRN1Q8IZH2 AC073621.1-201ENST00000392730 636 ntBASIC25.4■■□□□ 1.66
XRN1Q8IZH2 KRT18P65-201ENST00000439811 1286 ntBASIC25.4■■□□□ 1.66
XRN1Q8IZH2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
XRN1Q8IZH2 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
XRN1Q8IZH2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
XRN1Q8IZH2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC25.4■■□□□ 1.66
XRN1Q8IZH2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
XRN1Q8IZH2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
XRN1Q8IZH2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
XRN1Q8IZH2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
XRN1Q8IZH2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC25.4■■□□□ 1.66
XRN1Q8IZH2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
XRN1Q8IZH2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
XRN1Q8IZH2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
XRN1Q8IZH2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC25.39■■□□□ 1.66
XRN1Q8IZH2 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC25.39■■□□□ 1.66
XRN1Q8IZH2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
XRN1Q8IZH2 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC25.39■■□□□ 1.65
XRN1Q8IZH2 METTL21AP1-201ENST00000438852 635 ntBASIC25.39■■□□□ 1.65
XRN1Q8IZH2 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC25.39■■□□□ 1.65
XRN1Q8IZH2 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC25.39■■□□□ 1.65
XRN1Q8IZH2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC25.39■■□□□ 1.65
XRN1Q8IZH2 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC25.39■■□□□ 1.65
XRN1Q8IZH2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
XRN1Q8IZH2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
XRN1Q8IZH2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
XRN1Q8IZH2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
XRN1Q8IZH2 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
XRN1Q8IZH2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC25.38■■□□□ 1.65
XRN1Q8IZH2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
XRN1Q8IZH2 BEX3-201ENST00000361298 921 ntTSL 2 BASIC25.38■■□□□ 1.65
XRN1Q8IZH2 INIP-202ENST00000374236 874 ntTSL 2 BASIC25.38■■□□□ 1.65
XRN1Q8IZH2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
XRN1Q8IZH2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC25.38■■□□□ 1.65
XRN1Q8IZH2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC25.38■■□□□ 1.65
XRN1Q8IZH2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC25.38■■□□□ 1.65
XRN1Q8IZH2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
XRN1Q8IZH2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
XRN1Q8IZH2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
XRN1Q8IZH2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC25.38■■□□□ 1.65
XRN1Q8IZH2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC25.38■■□□□ 1.65
XRN1Q8IZH2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC25.38■■□□□ 1.65
XRN1Q8IZH2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC25.38■■□□□ 1.65
XRN1Q8IZH2 AC073592.4-201ENST00000623827 446 ntBASIC25.38■■□□□ 1.65
XRN1Q8IZH2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC25.38■■□□□ 1.65
XRN1Q8IZH2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC25.38■■□□□ 1.65
XRN1Q8IZH2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
XRN1Q8IZH2 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
XRN1Q8IZH2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC25.38■■□□□ 1.65
XRN1Q8IZH2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
XRN1Q8IZH2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC25.38■■□□□ 1.65
XRN1Q8IZH2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
XRN1Q8IZH2 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC25.37■■□□□ 1.65
XRN1Q8IZH2 YBX1P5-201ENST00000509441 847 ntBASIC25.37■■□□□ 1.65
XRN1Q8IZH2 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
XRN1Q8IZH2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC25.37■■□□□ 1.65
XRN1Q8IZH2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC25.37■■□□□ 1.65
XRN1Q8IZH2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
XRN1Q8IZH2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
XRN1Q8IZH2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
XRN1Q8IZH2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC25.37■■□□□ 1.65
XRN1Q8IZH2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
XRN1Q8IZH2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC25.37■■□□□ 1.65
XRN1Q8IZH2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
XRN1Q8IZH2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC25.37■■□□□ 1.65
XRN1Q8IZH2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
XRN1Q8IZH2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
XRN1Q8IZH2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
XRN1Q8IZH2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
XRN1Q8IZH2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
XRN1Q8IZH2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC25.36■■□□□ 1.65
XRN1Q8IZH2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
XRN1Q8IZH2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC25.36■■□□□ 1.65
XRN1Q8IZH2 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
XRN1Q8IZH2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC25.36■■□□□ 1.65
XRN1Q8IZH2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
XRN1Q8IZH2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
XRN1Q8IZH2 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC25.36■■□□□ 1.65
XRN1Q8IZH2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
XRN1Q8IZH2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC25.36■■□□□ 1.65
XRN1Q8IZH2 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC25.36■■□□□ 1.65
XRN1Q8IZH2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
XRN1Q8IZH2 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC25.36■■□□□ 1.65
XRN1Q8IZH2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
XRN1Q8IZH2 AC064836.3-201ENST00000607928 673 ntBASIC25.36■■□□□ 1.65
XRN1Q8IZH2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
XRN1Q8IZH2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC25.36■■□□□ 1.65
XRN1Q8IZH2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC25.36■■□□□ 1.65
XRN1Q8IZH2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
XRN1Q8IZH2 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
XRN1Q8IZH2 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms