Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL27A1Q8IZC6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.26■□□□□ 0.35
COL27A1Q8IZC6 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL27A1Q8IZC6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
COL27A1Q8IZC6 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.26■□□□□ 0.35
COL27A1Q8IZC6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.26■□□□□ 0.35
COL27A1Q8IZC6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL27A1Q8IZC6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.26■□□□□ 0.35
COL27A1Q8IZC6 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
COL27A1Q8IZC6 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL27A1Q8IZC6 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL27A1Q8IZC6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL27A1Q8IZC6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.26■□□□□ 0.35
COL27A1Q8IZC6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL27A1Q8IZC6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COL27A1Q8IZC6 MYLKP1-201ENST00000509077 1580 ntBASIC17.26■□□□□ 0.35
COL27A1Q8IZC6 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COL27A1Q8IZC6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.26■□□□□ 0.35
COL27A1Q8IZC6 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
COL27A1Q8IZC6 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
COL27A1Q8IZC6 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
COL27A1Q8IZC6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.25■□□□□ 0.35
COL27A1Q8IZC6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.25■□□□□ 0.35
COL27A1Q8IZC6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL27A1Q8IZC6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL27A1Q8IZC6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL27A1Q8IZC6 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.25■□□□□ 0.35
COL27A1Q8IZC6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.25■□□□□ 0.35
COL27A1Q8IZC6 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.25■□□□□ 0.35
COL27A1Q8IZC6 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.25■□□□□ 0.35
COL27A1Q8IZC6 HMGN1P19-201ENST00000436976 333 ntBASIC17.25■□□□□ 0.35
COL27A1Q8IZC6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.25■□□□□ 0.35
COL27A1Q8IZC6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.25■□□□□ 0.35
COL27A1Q8IZC6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.25■□□□□ 0.35
COL27A1Q8IZC6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.25■□□□□ 0.35
COL27A1Q8IZC6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL27A1Q8IZC6 AFG3L1P-217ENST00000557444 2447 ntBASIC17.25■□□□□ 0.35
COL27A1Q8IZC6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.25■□□□□ 0.35
COL27A1Q8IZC6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL27A1Q8IZC6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL27A1Q8IZC6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 RNA5SP415-201ENST00000517246 115 ntBASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 Z83851.2-201ENST00000609564 659 ntBASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 AC007952.6-201ENST00000573168 2673 ntBASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 AC003957.1-201ENST00000625108 2673 ntBASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.24■□□□□ 0.35
COL27A1Q8IZC6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL27A1Q8IZC6 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL27A1Q8IZC6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL27A1Q8IZC6 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL27A1Q8IZC6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
COL27A1Q8IZC6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.23■□□□□ 0.35
COL27A1Q8IZC6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.23■□□□□ 0.35
COL27A1Q8IZC6 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.23■□□□□ 0.35
COL27A1Q8IZC6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL27A1Q8IZC6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.23■□□□□ 0.35
COL27A1Q8IZC6 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
COL27A1Q8IZC6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.23■□□□□ 0.35
COL27A1Q8IZC6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL27A1Q8IZC6 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL27A1Q8IZC6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL27A1Q8IZC6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL27A1Q8IZC6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL27A1Q8IZC6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL27A1Q8IZC6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.23■□□□□ 0.35
COL27A1Q8IZC6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
COL27A1Q8IZC6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL27A1Q8IZC6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL27A1Q8IZC6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL27A1Q8IZC6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL27A1Q8IZC6 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL27A1Q8IZC6 YBX2P1-201ENST00000394192 760 ntBASIC17.22■□□□□ 0.35
COL27A1Q8IZC6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.22■□□□□ 0.35
COL27A1Q8IZC6 AC112698.1-201ENST00000510299 916 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms