Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS3Q8IXF0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS3Q8IXF0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.99■□□□□ 0.63
NPAS3Q8IXF0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
NPAS3Q8IXF0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS3Q8IXF0 MIR149-201ENST00000384879 89 ntBASIC18.99■□□□□ 0.63
NPAS3Q8IXF0 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
NPAS3Q8IXF0 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
NPAS3Q8IXF0 KRT18P67-201ENST00000432816 1264 ntBASIC18.99■□□□□ 0.63
NPAS3Q8IXF0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
NPAS3Q8IXF0 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.99■□□□□ 0.63
NPAS3Q8IXF0 AC113404.2-201ENST00000507884 177 ntBASIC18.99■□□□□ 0.63
NPAS3Q8IXF0 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.99■□□□□ 0.63
NPAS3Q8IXF0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.99■□□□□ 0.63
NPAS3Q8IXF0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.99■□□□□ 0.63
NPAS3Q8IXF0 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.99■□□□□ 0.63
NPAS3Q8IXF0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS3Q8IXF0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS3Q8IXF0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS3Q8IXF0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
NPAS3Q8IXF0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
NPAS3Q8IXF0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS3Q8IXF0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 AL031284.1-201ENST00000419297 478 ntBASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 PMS2P1-201ENST00000431037 1228 ntBASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 AC148477.8-201ENST00000624298 468 ntBASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS3Q8IXF0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 SLC25A1P1-201ENST00000528351 927 ntBASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 AC093484.2-201ENST00000580996 2166 ntBASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
NPAS3Q8IXF0 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPAS3Q8IXF0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms