Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC83Q8IWF9 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC83Q8IWF9 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC83Q8IWF9 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC83Q8IWF9 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC83Q8IWF9 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC83Q8IWF9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC83Q8IWF9 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CCDC83Q8IWF9 AL096828.2-201ENST00000567259 1965 ntBASIC21.61■■□□□ 1.05
CCDC83Q8IWF9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC83Q8IWF9 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC83Q8IWF9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC83Q8IWF9 GMCL1P1-201ENST00000463439 1581 ntBASIC21.61■■□□□ 1.05
CCDC83Q8IWF9 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC83Q8IWF9 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC83Q8IWF9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC83Q8IWF9 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC83Q8IWF9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC83Q8IWF9 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC83Q8IWF9 SDHAP2-201ENST00000455183 2001 ntBASIC21.6■■□□□ 1.05
CCDC83Q8IWF9 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC83Q8IWF9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC83Q8IWF9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC83Q8IWF9 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC83Q8IWF9 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CCDC83Q8IWF9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.6■■□□□ 1.05
CCDC83Q8IWF9 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC83Q8IWF9 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC83Q8IWF9 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC83Q8IWF9 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
CCDC83Q8IWF9 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC83Q8IWF9 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC83Q8IWF9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CCDC83Q8IWF9 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC83Q8IWF9 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CCDC83Q8IWF9 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC83Q8IWF9 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC83Q8IWF9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC83Q8IWF9 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 PHGDH-209ENST00000641074 1780 ntBASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 MIR718-201ENST00000390190 70 ntBASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 AL353719.1-201ENST00000566847 864 ntBASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 CR769767.2-201ENST00000622735 460 ntBASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 AL163051.1-201ENST00000569214 1512 ntBASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC83Q8IWF9 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC83Q8IWF9 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC83Q8IWF9 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC83Q8IWF9 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.58■■□□□ 1.05
CCDC83Q8IWF9 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC83Q8IWF9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC83Q8IWF9 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC83Q8IWF9 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC83Q8IWF9 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC83Q8IWF9 MIR1238-201ENST00000408483 83 ntBASIC21.58■■□□□ 1.05
CCDC83Q8IWF9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.58■■□□□ 1.05
CCDC83Q8IWF9 SNORA78-201ENST00000459373 127 ntBASIC21.58■■□□□ 1.05
CCDC83Q8IWF9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
CCDC83Q8IWF9 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC83Q8IWF9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
CCDC83Q8IWF9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.58■■□□□ 1.05
CCDC83Q8IWF9 MIR4785-201ENST00000585005 73 ntBASIC21.58■■□□□ 1.05
CCDC83Q8IWF9 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
CCDC83Q8IWF9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC83Q8IWF9 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.58■■□□□ 1.04
CCDC83Q8IWF9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.58■■□□□ 1.04
CCDC83Q8IWF9 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC83Q8IWF9 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.58■■□□□ 1.04
CCDC83Q8IWF9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.58■■□□□ 1.04
CCDC83Q8IWF9 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CCDC83Q8IWF9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CCDC83Q8IWF9 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CCDC83Q8IWF9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CCDC83Q8IWF9 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC83Q8IWF9 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC83Q8IWF9 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms