Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.97■□□□□ 0.47
VRK3Q8IV63 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.97■□□□□ 0.47
VRK3Q8IV63 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
VRK3Q8IV63 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.97■□□□□ 0.47
VRK3Q8IV63 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
VRK3Q8IV63 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
VRK3Q8IV63 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
VRK3Q8IV63 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VRK3Q8IV63 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VRK3Q8IV63 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
VRK3Q8IV63 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.97■□□□□ 0.47
VRK3Q8IV63 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.97■□□□□ 0.47
VRK3Q8IV63 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VRK3Q8IV63 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VRK3Q8IV63 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VRK3Q8IV63 AC093677.2-201ENST00000600169 1863 ntBASIC17.97■□□□□ 0.47
VRK3Q8IV63 AL024508.2-201ENST00000607749 1894 ntBASIC17.97■□□□□ 0.47
VRK3Q8IV63 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.97■□□□□ 0.47
VRK3Q8IV63 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
VRK3Q8IV63 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VRK3Q8IV63 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VRK3Q8IV63 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VRK3Q8IV63 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VRK3Q8IV63 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.96■□□□□ 0.47
VRK3Q8IV63 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.96■□□□□ 0.47
VRK3Q8IV63 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VRK3Q8IV63 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VRK3Q8IV63 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VRK3Q8IV63 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VRK3Q8IV63 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VRK3Q8IV63 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
VRK3Q8IV63 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.96■□□□□ 0.47
VRK3Q8IV63 AC034232.1-201ENST00000506026 1064 ntBASIC17.96■□□□□ 0.47
VRK3Q8IV63 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VRK3Q8IV63 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.96■□□□□ 0.47
VRK3Q8IV63 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VRK3Q8IV63 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VRK3Q8IV63 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VRK3Q8IV63 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.96■□□□□ 0.47
VRK3Q8IV63 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
VRK3Q8IV63 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
VRK3Q8IV63 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
VRK3Q8IV63 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
VRK3Q8IV63 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VRK3Q8IV63 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VRK3Q8IV63 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.95■□□□□ 0.46
VRK3Q8IV63 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VRK3Q8IV63 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VRK3Q8IV63 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VRK3Q8IV63 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
VRK3Q8IV63 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VRK3Q8IV63 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VRK3Q8IV63 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
VRK3Q8IV63 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VRK3Q8IV63 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.95■□□□□ 0.46
VRK3Q8IV63 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
VRK3Q8IV63 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
VRK3Q8IV63 AC022616.7-201ENST00000525383 220 ntBASIC17.95■□□□□ 0.46
VRK3Q8IV63 AC009065.1-201ENST00000564055 1225 ntBASIC17.95■□□□□ 0.46
VRK3Q8IV63 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
VRK3Q8IV63 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VRK3Q8IV63 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VRK3Q8IV63 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.95■□□□□ 0.46
VRK3Q8IV63 GMCL1P1-201ENST00000463439 1581 ntBASIC17.95■□□□□ 0.46
VRK3Q8IV63 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
VRK3Q8IV63 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
VRK3Q8IV63 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
VRK3Q8IV63 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.95■□□□□ 0.46
VRK3Q8IV63 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VRK3Q8IV63 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
VRK3Q8IV63 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.94■□□□□ 0.46
VRK3Q8IV63 AC007613.1-201ENST00000572811 2597 ntBASIC17.94■□□□□ 0.46
VRK3Q8IV63 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.94■□□□□ 0.46
VRK3Q8IV63 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
VRK3Q8IV63 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VRK3Q8IV63 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VRK3Q8IV63 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VRK3Q8IV63 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.94■□□□□ 0.46
VRK3Q8IV63 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VRK3Q8IV63 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VRK3Q8IV63 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
VRK3Q8IV63 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.94■□□□□ 0.46
VRK3Q8IV63 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VRK3Q8IV63 PVRIG2P-201ENST00000435460 978 ntBASIC17.94■□□□□ 0.46
VRK3Q8IV63 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VRK3Q8IV63 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VRK3Q8IV63 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.94■□□□□ 0.46
VRK3Q8IV63 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VRK3Q8IV63 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.94■□□□□ 0.46
VRK3Q8IV63 HYMAI.1-201ENST00000620949 238 ntBASIC17.94■□□□□ 0.46
VRK3Q8IV63 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
VRK3Q8IV63 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VRK3Q8IV63 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
VRK3Q8IV63 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VRK3Q8IV63 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
VRK3Q8IV63 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VRK3Q8IV63 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VRK3Q8IV63 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VRK3Q8IV63 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
VRK3Q8IV63 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms