Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.39■□□□□ 0.53
CRLF3Q8IUI8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CRLF3Q8IUI8 AC112777.1-201ENST00000540175 1423 ntBASIC18.39■□□□□ 0.53
CRLF3Q8IUI8 NBPF21P-201ENST00000425093 1451 ntBASIC18.39■□□□□ 0.53
CRLF3Q8IUI8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CRLF3Q8IUI8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CRLF3Q8IUI8 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CRLF3Q8IUI8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 PRORSD1P-202ENST00000563365 2154 ntBASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 AC093677.2-201ENST00000600169 1863 ntBASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 AC233702.5-201ENST00000584107 538 ntBASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 AC139713.2-201ENST00000641328 2723 ntBASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CRLF3Q8IUI8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CRLF3Q8IUI8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CRLF3Q8IUI8 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.36■□□□□ 0.53
CRLF3Q8IUI8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CRLF3Q8IUI8 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CRLF3Q8IUI8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CRLF3Q8IUI8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.36■□□□□ 0.53
CRLF3Q8IUI8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CRLF3Q8IUI8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.36■□□□□ 0.53
CRLF3Q8IUI8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CRLF3Q8IUI8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CRLF3Q8IUI8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.36■□□□□ 0.53
CRLF3Q8IUI8 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CRLF3Q8IUI8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.36■□□□□ 0.53
CRLF3Q8IUI8 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.36■□□□□ 0.53
CRLF3Q8IUI8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms