Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 AC133681.1-201ENST00000465482 601 ntBASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 AC073648.6-201ENST00000641589 218 ntBASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 RN7SL471P-201ENST00000580476 299 ntBASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTCHD4Q6ZW05 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 POU5F1P3-201ENST00000428824 1078 ntBASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 AC006058.3-201ENST00000606217 1069 ntBASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 AC110285.5-201ENST00000611501 352 ntBASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 AL445675.2-201ENST00000620291 557 ntBASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.92■□□□□ 0.3
PTCHD4Q6ZW05 REXO1L9P-201ENST00000604264 2108 ntBASIC16.91■□□□□ 0.3
PTCHD4Q6ZW05 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTCHD4Q6ZW05 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms