Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.37■□□□□ 0.53
BRAT1Q6PJG6 BX276092.5-203ENST00000456199 560 ntBASIC18.37■□□□□ 0.53
BRAT1Q6PJG6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.37■□□□□ 0.53
BRAT1Q6PJG6 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.37■□□□□ 0.53
BRAT1Q6PJG6 KRT8P26-201ENST00000534154 1276 ntBASIC18.37■□□□□ 0.53
BRAT1Q6PJG6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.37■□□□□ 0.53
BRAT1Q6PJG6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.37■□□□□ 0.53
BRAT1Q6PJG6 RNF126P1-202ENST00000569893 925 ntBASIC18.37■□□□□ 0.53
BRAT1Q6PJG6 AC005332.3-201ENST00000589904 676 ntBASIC18.37■□□□□ 0.53
BRAT1Q6PJG6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BRAT1Q6PJG6 GPR32P1-201ENST00000601788 811 ntBASIC18.37■□□□□ 0.53
BRAT1Q6PJG6 AL121672.3-201ENST00000608644 468 ntBASIC18.37■□□□□ 0.53
BRAT1Q6PJG6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
BRAT1Q6PJG6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRAT1Q6PJG6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.37■□□□□ 0.53
BRAT1Q6PJG6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRAT1Q6PJG6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.37■□□□□ 0.53
BRAT1Q6PJG6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
BRAT1Q6PJG6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRAT1Q6PJG6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRAT1Q6PJG6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRAT1Q6PJG6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.37■□□□□ 0.53
BRAT1Q6PJG6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
BRAT1Q6PJG6 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRAT1Q6PJG6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BRAT1Q6PJG6 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.37■□□□□ 0.53
BRAT1Q6PJG6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BRAT1Q6PJG6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRAT1Q6PJG6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRAT1Q6PJG6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRAT1Q6PJG6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
BRAT1Q6PJG6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.36■□□□□ 0.53
BRAT1Q6PJG6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRAT1Q6PJG6 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
BRAT1Q6PJG6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRAT1Q6PJG6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
BRAT1Q6PJG6 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.36■□□□□ 0.53
BRAT1Q6PJG6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRAT1Q6PJG6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
BRAT1Q6PJG6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
BRAT1Q6PJG6 TSPY22P-201ENST00000427496 604 ntBASIC18.36■□□□□ 0.53
BRAT1Q6PJG6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.36■□□□□ 0.53
BRAT1Q6PJG6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.36■□□□□ 0.53
BRAT1Q6PJG6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRAT1Q6PJG6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRAT1Q6PJG6 AC113404.2-201ENST00000507884 177 ntBASIC18.36■□□□□ 0.53
BRAT1Q6PJG6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.36■□□□□ 0.53
BRAT1Q6PJG6 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.36■□□□□ 0.53
BRAT1Q6PJG6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRAT1Q6PJG6 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.36■□□□□ 0.53
BRAT1Q6PJG6 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.36■□□□□ 0.53
BRAT1Q6PJG6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
BRAT1Q6PJG6 AC099343.3-201ENST00000605834 2503 ntBASIC18.36■□□□□ 0.53
BRAT1Q6PJG6 AL390719.2-201ENST00000606993 987 ntBASIC18.36■□□□□ 0.53
BRAT1Q6PJG6 Z83836.1-201ENST00000624605 1642 ntBASIC18.36■□□□□ 0.53
BRAT1Q6PJG6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRAT1Q6PJG6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRAT1Q6PJG6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRAT1Q6PJG6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 AC005082.1-201ENST00000413042 2259 ntBASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 AL138781.2-201ENST00000617896 1843 ntBASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
BRAT1Q6PJG6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BRAT1Q6PJG6 GMCL1P1-201ENST00000463439 1581 ntBASIC18.34■□□□□ 0.53
BRAT1Q6PJG6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRAT1Q6PJG6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRAT1Q6PJG6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRAT1Q6PJG6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRAT1Q6PJG6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BRAT1Q6PJG6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
BRAT1Q6PJG6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRAT1Q6PJG6 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms