Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 FEM1AP3-201ENST00000403722 1741 ntBASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 TSPY7P-201ENST00000431358 1114 ntBASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 AC008040.2-201ENST00000461049 708 ntBASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 PRSS44-201ENST00000515154 1146 ntBASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 PRORSD1P-202ENST00000563365 2154 ntBASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 AC126763.1-201ENST00000552015 2118 ntBASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
ATPAF1Q5TC12 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 FAM207BP-201ENST00000447172 505 ntBASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATPAF1Q5TC12 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 TSPY23P-201ENST00000440136 739 ntBASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATPAF1Q5TC12 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
ATPAF1Q5TC12 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
ATPAF1Q5TC12 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
ATPAF1Q5TC12 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms