Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CHRFAM7AQ494W8 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 AL031133.1-201ENST00000406807 723 ntBASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 FAM207BP-201ENST00000447172 505 ntBASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 B3GAT3P1-201ENST00000471720 806 ntBASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 FAM87A-204ENST00000613235 858 ntBASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.1■□□□□ 0.17
CHRFAM7AQ494W8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 AC139887.4-201ENST00000607877 719 ntBASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 MYC-208ENST00000641036 567 ntBASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 AL354751.1-201ENST00000412768 1863 ntBASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHRFAM7AQ494W8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CHRFAM7AQ494W8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CHRFAM7AQ494W8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.08■□□□□ 0.17
CHRFAM7AQ494W8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
CHRFAM7AQ494W8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.08■□□□□ 0.17
CHRFAM7AQ494W8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CHRFAM7AQ494W8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CHRFAM7AQ494W8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.08■□□□□ 0.17
CHRFAM7AQ494W8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CHRFAM7AQ494W8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 MESTP1-201ENST00000404287 994 ntBASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 AC026396.1-201ENST00000419388 421 ntBASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 C1QL1P1-201ENST00000568105 661 ntBASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 AC131212.4-201ENST00000623606 975 ntBASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 AC116562.4-202ENST00000641738 218 ntBASIC16.08■□□□□ 0.16
CHRFAM7AQ494W8 CROCCP1-201ENST00000426910 5675 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms