Protein–RNA interactions for Protein: Q06547

GABPB1, GA-binding protein subunit beta-1, humanhuman

Predicted RBP Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1Q06547 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GABPB1Q06547 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GABPB1Q06547 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.81■□□□□ 0.6
GABPB1Q06547 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.81■□□□□ 0.6
GABPB1Q06547 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GABPB1Q06547 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.81■□□□□ 0.6
GABPB1Q06547 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
GABPB1Q06547 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GABPB1Q06547 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GABPB1Q06547 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
GABPB1Q06547 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GABPB1Q06547 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GABPB1Q06547 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GABPB1Q06547 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GABPB1Q06547 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
GABPB1Q06547 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.81■□□□□ 0.6
GABPB1Q06547 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.81■□□□□ 0.6
GABPB1Q06547 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GABPB1Q06547 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GABPB1Q06547 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.8■□□□□ 0.6
GABPB1Q06547 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
GABPB1Q06547 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GABPB1Q06547 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GABPB1Q06547 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
GABPB1Q06547 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.8■□□□□ 0.6
GABPB1Q06547 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
GABPB1Q06547 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
GABPB1Q06547 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.8■□□□□ 0.6
GABPB1Q06547 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GABPB1Q06547 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GABPB1Q06547 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.8■□□□□ 0.6
GABPB1Q06547 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.8■□□□□ 0.6
GABPB1Q06547 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
GABPB1Q06547 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.8■□□□□ 0.6
GABPB1Q06547 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.8■□□□□ 0.6
GABPB1Q06547 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.8■□□□□ 0.6
GABPB1Q06547 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.8■□□□□ 0.6
GABPB1Q06547 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
GABPB1Q06547 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GABPB1Q06547 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GABPB1Q06547 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.8■□□□□ 0.6
GABPB1Q06547 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GABPB1Q06547 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
GABPB1Q06547 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GABPB1Q06547 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GABPB1Q06547 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GABPB1Q06547 AC018553.1-201ENST00000616682 1458 ntBASIC18.79■□□□□ 0.6
GABPB1Q06547 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GABPB1Q06547 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
GABPB1Q06547 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
GABPB1Q06547 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
GABPB1Q06547 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
GABPB1Q06547 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.79■□□□□ 0.6
GABPB1Q06547 AC097381.1-201ENST00000429019 1296 ntBASIC18.79■□□□□ 0.6
GABPB1Q06547 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GABPB1Q06547 AL031848.2-201ENST00000607670 837 ntBASIC18.79■□□□□ 0.6
GABPB1Q06547 AC010997.5-201ENST00000609182 354 ntBASIC18.79■□□□□ 0.6
GABPB1Q06547 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.79■□□□□ 0.6
GABPB1Q06547 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GABPB1Q06547 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GABPB1Q06547 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
GABPB1Q06547 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GABPB1Q06547 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.79■□□□□ 0.6
GABPB1Q06547 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
GABPB1Q06547 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
GABPB1Q06547 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
GABPB1Q06547 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GABPB1Q06547 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GABPB1Q06547 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
GABPB1Q06547 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
GABPB1Q06547 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GABPB1Q06547 FER1L4-210ENST00000615531 5998 ntBASIC18.78■□□□□ 0.6
GABPB1Q06547 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.78■□□□□ 0.6
GABPB1Q06547 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GABPB1Q06547 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
GABPB1Q06547 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
GABPB1Q06547 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GABPB1Q06547 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
GABPB1Q06547 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.78■□□□□ 0.6
GABPB1Q06547 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
GABPB1Q06547 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GABPB1Q06547 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.78■□□□□ 0.6
GABPB1Q06547 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.78■□□□□ 0.6
GABPB1Q06547 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GABPB1Q06547 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GABPB1Q06547 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.78■□□□□ 0.6
GABPB1Q06547 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
GABPB1Q06547 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GABPB1Q06547 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GABPB1Q06547 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GABPB1Q06547 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GABPB1Q06547 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GABPB1Q06547 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GABPB1Q06547 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GABPB1Q06547 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GABPB1Q06547 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.77■□□□□ 0.6
GABPB1Q06547 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
GABPB1Q06547 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GABPB1Q06547 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GABPB1Q06547 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms