Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 KRT18P48-201ENST00000434763 852 ntBASIC18.48■□□□□ 0.55
AP1S1P61966 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.48■□□□□ 0.55
AP1S1P61966 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.48■□□□□ 0.55
AP1S1P61966 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.48■□□□□ 0.55
AP1S1P61966 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.48■□□□□ 0.55
AP1S1P61966 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP1S1P61966 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP1S1P61966 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.48■□□□□ 0.55
AP1S1P61966 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP1S1P61966 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
AP1S1P61966 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.48■□□□□ 0.55
AP1S1P61966 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
AP1S1P61966 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.48■□□□□ 0.55
AP1S1P61966 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP1S1P61966 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.48■□□□□ 0.55
AP1S1P61966 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
AP1S1P61966 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP1S1P61966 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP1S1P61966 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
AP1S1P61966 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP1S1P61966 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP1S1P61966 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP1S1P61966 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.47■□□□□ 0.55
AP1S1P61966 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP1S1P61966 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP1S1P61966 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.47■□□□□ 0.55
AP1S1P61966 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.47■□□□□ 0.55
AP1S1P61966 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
AP1S1P61966 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
AP1S1P61966 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.47■□□□□ 0.55
AP1S1P61966 FAM86EP-206ENST00000510506 987 ntBASIC18.47■□□□□ 0.55
AP1S1P61966 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.47■□□□□ 0.55
AP1S1P61966 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.47■□□□□ 0.55
AP1S1P61966 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.47■□□□□ 0.55
AP1S1P61966 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.47■□□□□ 0.55
AP1S1P61966 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
AP1S1P61966 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.47■□□□□ 0.55
AP1S1P61966 AC090164.3-201ENST00000610780 2143 ntBASIC18.47■□□□□ 0.55
AP1S1P61966 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.47■□□□□ 0.55
AP1S1P61966 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
AP1S1P61966 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
AP1S1P61966 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP1S1P61966 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.47■□□□□ 0.55
AP1S1P61966 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP1S1P61966 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
AP1S1P61966 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP1S1P61966 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
AP1S1P61966 AL162741.1-201ENST00000565563 1558 ntBASIC18.47■□□□□ 0.55
AP1S1P61966 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP1S1P61966 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP1S1P61966 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.46■□□□□ 0.55
AP1S1P61966 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.46■□□□□ 0.55
AP1S1P61966 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP1S1P61966 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP1S1P61966 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
AP1S1P61966 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP1S1P61966 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
AP1S1P61966 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.46■□□□□ 0.55
AP1S1P61966 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP1S1P61966 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.46■□□□□ 0.55
AP1S1P61966 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP1S1P61966 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP1S1P61966 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
AP1S1P61966 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.46■□□□□ 0.55
AP1S1P61966 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.46■□□□□ 0.55
AP1S1P61966 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.46■□□□□ 0.55
AP1S1P61966 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.46■□□□□ 0.55
AP1S1P61966 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.46■□□□□ 0.55
AP1S1P61966 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP1S1P61966 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
AP1S1P61966 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
AP1S1P61966 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.46■□□□□ 0.55
AP1S1P61966 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
AP1S1P61966 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
AP1S1P61966 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP1S1P61966 AC005332.1-201ENST00000577698 1310 ntBASIC18.46■□□□□ 0.55
AP1S1P61966 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
AP1S1P61966 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.46■□□□□ 0.54
AP1S1P61966 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
AP1S1P61966 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP1S1P61966 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP1S1P61966 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.45■□□□□ 0.54
AP1S1P61966 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP1S1P61966 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
AP1S1P61966 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.45■□□□□ 0.54
AP1S1P61966 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP1S1P61966 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.45■□□□□ 0.54
AP1S1P61966 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP1S1P61966 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.45■□□□□ 0.54
AP1S1P61966 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP1S1P61966 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP1S1P61966 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
AP1S1P61966 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
AP1S1P61966 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.45■□□□□ 0.54
AP1S1P61966 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.45■□□□□ 0.54
AP1S1P61966 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
AP1S1P61966 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
AP1S1P61966 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
AP1S1P61966 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.45■□□□□ 0.54
AP1S1P61966 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms