Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCKAP1LP55160 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCKAP1LP55160 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCKAP1LP55160 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCKAP1LP55160 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.1■□□□□ 0.81
NCKAP1LP55160 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.1■□□□□ 0.81
NCKAP1LP55160 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.1■□□□□ 0.81
NCKAP1LP55160 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.1■□□□□ 0.81
NCKAP1LP55160 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.1■□□□□ 0.81
NCKAP1LP55160 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.1■□□□□ 0.81
NCKAP1LP55160 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
NCKAP1LP55160 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NCKAP1LP55160 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCKAP1LP55160 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NCKAP1LP55160 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
NCKAP1LP55160 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.1■□□□□ 0.81
NCKAP1LP55160 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCKAP1LP55160 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCKAP1LP55160 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NCKAP1LP55160 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NCKAP1LP55160 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.1■□□□□ 0.81
NCKAP1LP55160 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
NCKAP1LP55160 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.09■□□□□ 0.81
NCKAP1LP55160 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.09■□□□□ 0.81
NCKAP1LP55160 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NCKAP1LP55160 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
NCKAP1LP55160 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NCKAP1LP55160 AL162741.1-201ENST00000565563 1558 ntBASIC20.09■□□□□ 0.81
NCKAP1LP55160 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NCKAP1LP55160 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NCKAP1LP55160 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NCKAP1LP55160 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.09■□□□□ 0.81
NCKAP1LP55160 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NCKAP1LP55160 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.09■□□□□ 0.81
NCKAP1LP55160 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.09■□□□□ 0.81
NCKAP1LP55160 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.09■□□□□ 0.81
NCKAP1LP55160 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
NCKAP1LP55160 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.09■□□□□ 0.81
NCKAP1LP55160 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NCKAP1LP55160 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NCKAP1LP55160 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NCKAP1LP55160 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.09■□□□□ 0.81
NCKAP1LP55160 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NCKAP1LP55160 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
NCKAP1LP55160 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.09■□□□□ 0.81
NCKAP1LP55160 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
NCKAP1LP55160 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NCKAP1LP55160 AC005332.1-201ENST00000577698 1310 ntBASIC20.08■□□□□ 0.81
NCKAP1LP55160 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NCKAP1LP55160 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NCKAP1LP55160 AC093677.2-201ENST00000600169 1863 ntBASIC20.08■□□□□ 0.81
NCKAP1LP55160 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NCKAP1LP55160 ARMC10P1-201ENST00000313754 855 ntBASIC20.08■□□□□ 0.81
NCKAP1LP55160 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NCKAP1LP55160 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NCKAP1LP55160 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NCKAP1LP55160 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.08■□□□□ 0.81
NCKAP1LP55160 AL645929.1-201ENST00000420084 975 ntBASIC20.08■□□□□ 0.81
NCKAP1LP55160 KRT18P48-201ENST00000434763 852 ntBASIC20.08■□□□□ 0.81
NCKAP1LP55160 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NCKAP1LP55160 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.08■□□□□ 0.81
NCKAP1LP55160 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.08■□□□□ 0.81
NCKAP1LP55160 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
NCKAP1LP55160 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NCKAP1LP55160 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NCKAP1LP55160 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
NCKAP1LP55160 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NCKAP1LP55160 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NCKAP1LP55160 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.08■□□□□ 0.8
NCKAP1LP55160 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NCKAP1LP55160 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NCKAP1LP55160 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NCKAP1LP55160 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NCKAP1LP55160 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NCKAP1LP55160 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
NCKAP1LP55160 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.07■□□□□ 0.8
NCKAP1LP55160 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.07■□□□□ 0.8
NCKAP1LP55160 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NCKAP1LP55160 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
NCKAP1LP55160 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NCKAP1LP55160 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
NCKAP1LP55160 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NCKAP1LP55160 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NCKAP1LP55160 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
NCKAP1LP55160 AC113404.2-201ENST00000507884 177 ntBASIC20.07■□□□□ 0.8
NCKAP1LP55160 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.07■□□□□ 0.8
NCKAP1LP55160 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.07■□□□□ 0.8
NCKAP1LP55160 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.07■□□□□ 0.8
NCKAP1LP55160 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.07■□□□□ 0.8
NCKAP1LP55160 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
NCKAP1LP55160 AC008687.5-201ENST00000593746 558 ntBASIC20.07■□□□□ 0.8
NCKAP1LP55160 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
NCKAP1LP55160 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NCKAP1LP55160 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.07■□□□□ 0.8
NCKAP1LP55160 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.07■□□□□ 0.8
NCKAP1LP55160 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NCKAP1LP55160 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NCKAP1LP55160 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NCKAP1LP55160 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NCKAP1LP55160 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms