Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC145285.3-201ENST00000564603 959 ntBASIC18.15■□□□□ 0.5
LIMK1P53667 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.15■□□□□ 0.5
LIMK1P53667 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.15■□□□□ 0.5
LIMK1P53667 AC008608.2-201ENST00000606089 416 ntBASIC18.15■□□□□ 0.5
LIMK1P53667 FAM215A-202ENST00000632077 792 ntBASIC18.15■□□□□ 0.5
LIMK1P53667 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LIMK1P53667 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.15■□□□□ 0.5
LIMK1P53667 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LIMK1P53667 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LIMK1P53667 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
LIMK1P53667 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LIMK1P53667 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LIMK1P53667 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
LIMK1P53667 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
LIMK1P53667 AC104417.2-201ENST00000562989 1793 ntBASIC18.14■□□□□ 0.5
LIMK1P53667 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.14■□□□□ 0.5
LIMK1P53667 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
LIMK1P53667 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LIMK1P53667 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.14■□□□□ 0.49
LIMK1P53667 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LIMK1P53667 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LIMK1P53667 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LIMK1P53667 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.14■□□□□ 0.49
LIMK1P53667 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LIMK1P53667 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.14■□□□□ 0.49
LIMK1P53667 MIR5100-201ENST00000579544 119 ntBASIC18.14■□□□□ 0.49
LIMK1P53667 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.14■□□□□ 0.49
LIMK1P53667 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.14■□□□□ 0.49
LIMK1P53667 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.14■□□□□ 0.49
LIMK1P53667 AC027601.4-201ENST00000611259 610 ntBASIC18.14■□□□□ 0.49
LIMK1P53667 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LIMK1P53667 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LIMK1P53667 FAM197Y3-203ENST00000618346 717 ntBASIC18.14■□□□□ 0.49
LIMK1P53667 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LIMK1P53667 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
LIMK1P53667 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LIMK1P53667 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
LIMK1P53667 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LIMK1P53667 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LIMK1P53667 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.14■□□□□ 0.49
LIMK1P53667 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.14■□□□□ 0.49
LIMK1P53667 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.14■□□□□ 0.49
LIMK1P53667 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LIMK1P53667 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LIMK1P53667 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK1P53667 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LIMK1P53667 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK1P53667 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.13■□□□□ 0.49
LIMK1P53667 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.13■□□□□ 0.49
LIMK1P53667 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
LIMK1P53667 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.13■□□□□ 0.49
LIMK1P53667 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.13■□□□□ 0.49
LIMK1P53667 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK1P53667 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK1P53667 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK1P53667 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
LIMK1P53667 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.13■□□□□ 0.49
LIMK1P53667 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.13■□□□□ 0.49
LIMK1P53667 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LIMK1P53667 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.13■□□□□ 0.49
LIMK1P53667 AC011840.4-201ENST00000578471 627 ntBASIC18.13■□□□□ 0.49
LIMK1P53667 MIR3180-4-201ENST00000582223 153 ntBASIC18.13■□□□□ 0.49
LIMK1P53667 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK1P53667 AL049840.3-201ENST00000602669 611 ntBASIC18.13■□□□□ 0.49
LIMK1P53667 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK1P53667 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK1P53667 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.13■□□□□ 0.49
LIMK1P53667 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
LIMK1P53667 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK1P53667 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK1P53667 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK1P53667 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LIMK1P53667 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.13■□□□□ 0.49
LIMK1P53667 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.13■□□□□ 0.49
LIMK1P53667 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LIMK1P53667 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LIMK1P53667 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LIMK1P53667 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LIMK1P53667 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LIMK1P53667 RPSAP43-201ENST00000402237 625 ntBASIC18.12■□□□□ 0.49
LIMK1P53667 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LIMK1P53667 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LIMK1P53667 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.12■□□□□ 0.49
LIMK1P53667 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.12■□□□□ 0.49
LIMK1P53667 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LIMK1P53667 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.12■□□□□ 0.49
LIMK1P53667 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.12■□□□□ 0.49
LIMK1P53667 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.12■□□□□ 0.49
LIMK1P53667 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LIMK1P53667 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
LIMK1P53667 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LIMK1P53667 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LIMK1P53667 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.11■□□□□ 0.49
LIMK1P53667 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LIMK1P53667 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LIMK1P53667 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LIMK1P53667 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LIMK1P53667 GPX1P2-201ENST00000429271 606 ntBASIC18.11■□□□□ 0.49
LIMK1P53667 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.11■□□□□ 0.49
LIMK1P53667 AL591424.1-201ENST00000442569 1213 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms