Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.84■□□□□ 0.45
PDX1P52945 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDX1P52945 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDX1P52945 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDX1P52945 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.84■□□□□ 0.45
PDX1P52945 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDX1P52945 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDX1P52945 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDX1P52945 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.84■□□□□ 0.45
PDX1P52945 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.84■□□□□ 0.45
PDX1P52945 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.84■□□□□ 0.45
PDX1P52945 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.84■□□□□ 0.45
PDX1P52945 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDX1P52945 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PDX1P52945 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.84■□□□□ 0.45
PDX1P52945 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDX1P52945 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.84■□□□□ 0.45
PDX1P52945 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDX1P52945 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDX1P52945 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.83■□□□□ 0.45
PDX1P52945 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDX1P52945 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDX1P52945 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.83■□□□□ 0.45
PDX1P52945 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PDX1P52945 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDX1P52945 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.83■□□□□ 0.44
PDX1P52945 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PDX1P52945 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.83■□□□□ 0.44
PDX1P52945 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.83■□□□□ 0.44
PDX1P52945 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDX1P52945 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDX1P52945 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.83■□□□□ 0.44
PDX1P52945 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.83■□□□□ 0.44
PDX1P52945 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.83■□□□□ 0.44
PDX1P52945 FOSL1P1-201ENST00000511041 816 ntBASIC17.83■□□□□ 0.44
PDX1P52945 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.83■□□□□ 0.44
PDX1P52945 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.83■□□□□ 0.44
PDX1P52945 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
PDX1P52945 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.83■□□□□ 0.44
PDX1P52945 AC005332.3-201ENST00000589904 676 ntBASIC17.83■□□□□ 0.44
PDX1P52945 AC104692.2-201ENST00000603054 253 ntBASIC17.83■□□□□ 0.44
PDX1P52945 AL390719.2-201ENST00000606993 987 ntBASIC17.83■□□□□ 0.44
PDX1P52945 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.83■□□□□ 0.44
PDX1P52945 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.83■□□□□ 0.44
PDX1P52945 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PDX1P52945 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
PDX1P52945 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PDX1P52945 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDX1P52945 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDX1P52945 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDX1P52945 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDX1P52945 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDX1P52945 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDX1P52945 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDX1P52945 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDX1P52945 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDX1P52945 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.82■□□□□ 0.44
PDX1P52945 AC093503.3-201ENST00000624917 2352 ntBASIC17.82■□□□□ 0.44
PDX1P52945 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDX1P52945 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDX1P52945 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDX1P52945 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.82■□□□□ 0.44
PDX1P52945 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDX1P52945 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.82■□□□□ 0.44
PDX1P52945 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDX1P52945 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.82■□□□□ 0.44
PDX1P52945 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDX1P52945 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDX1P52945 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDX1P52945 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.82■□□□□ 0.44
PDX1P52945 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.82■□□□□ 0.44
PDX1P52945 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.82■□□□□ 0.44
PDX1P52945 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.82■□□□□ 0.44
PDX1P52945 AC012615.1-201ENST00000565797 1299 ntBASIC17.82■□□□□ 0.44
PDX1P52945 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.82■□□□□ 0.44
PDX1P52945 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.82■□□□□ 0.44
PDX1P52945 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDX1P52945 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PDX1P52945 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDX1P52945 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PDX1P52945 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.82■□□□□ 0.44
PDX1P52945 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDX1P52945 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDX1P52945 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDX1P52945 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDX1P52945 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDX1P52945 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDX1P52945 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PDX1P52945 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
PDX1P52945 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDX1P52945 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDX1P52945 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDX1P52945 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDX1P52945 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PDX1P52945 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDX1P52945 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PDX1P52945 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDX1P52945 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
PDX1P52945 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDX1P52945 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms